BLASTX nr result

ID: Cimicifuga21_contig00032012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00032012
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541522.1| PREDICTED: uncharacterized protein LOC100783...   143   2e-32
ref|XP_002300538.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002518393.1| vacuolar protein sorting-associated protein,...   137   1e-30
ref|XP_003571321.1| PREDICTED: uncharacterized protein LOC100822...   133   2e-29
ref|NP_001060855.1| Os08g0116700 [Oryza sativa Japonica Group] g...   131   7e-29

>ref|XP_003541522.1| PREDICTED: uncharacterized protein LOC100783352 [Glycine max]
          Length = 3441

 Score =  143 bits (360), Expect = 2e-32
 Identities = 75/131 (57%), Positives = 91/131 (69%), Gaps = 6/131 (4%)
 Frame = +1

Query: 1   GRFRPCSSTLCSKPEGWTKMWWQYAQESVLSDVRKRLRKTSWRYLGWRISYRRNYVSLYK 180
           GRFRP    L  K EGW   WW YAQESVLSDVR++L+KTSWRYLG R+S+RR Y++LYK
Sbjct: 267 GRFRPWHCLLPRKCEGWQIFWWHYAQESVLSDVRRKLKKTSWRYLGDRLSFRRKYLNLYK 326

Query: 181 ---KFIRHAQPVDKDILLEMEQMEKEIDVDDILAYRSIAERESQEFLLSSTLPNVGKYS- 348
               F++  Q VD D+L ++EQMEKE D+DDIL YRS AE E QEFL   ++PN GK + 
Sbjct: 327 AKLDFLQQEQLVDDDVLRDLEQMEKESDLDDILNYRSAAEYEMQEFLSRCSMPNNGKINN 386

Query: 349 --AAGKQQNDE 375
                K  NDE
Sbjct: 387 DIPTEKSCNDE 397


>ref|XP_002300538.1| predicted protein [Populus trichocarpa] gi|222847796|gb|EEE85343.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/135 (51%), Positives = 97/135 (71%), Gaps = 6/135 (4%)
 Frame = +1

Query: 1   GRFRPCSSTLCSKPEGWTKMWWQYAQESVLSDVRKRLRKTSWRYLGWRISYRRNYVSLYK 180
           GR+RP    L  K +GW ++WW YAQES+L+DVR +L+KTSWRYLG R+S+RR Y++LY+
Sbjct: 219 GRYRPWGCPLSRKQDGWQRLWWHYAQESILADVRLKLKKTSWRYLGQRLSFRRKYINLYQ 278

Query: 181 ---KFIRHAQPVDKDILLEMEQMEKEIDVDDILAYRSIAERESQEFL---LSSTLPNVGK 342
              +F+   Q +D+ I+ ++EQMEKE D+DDIL+YRS+AE + QE L   LSS +   G 
Sbjct: 279 TKLEFLHREQAIDEYIIQDLEQMEKESDIDDILSYRSVAELKLQEVLSNSLSSNMEVNGA 338

Query: 343 YSAAGKQQNDEGSSA 387
           +S   K QNDE SS+
Sbjct: 339 HSFIEKSQNDERSSS 353


>ref|XP_002518393.1| vacuolar protein sorting-associated protein, putative [Ricinus
           communis] gi|223542238|gb|EEF43780.1| vacuolar protein
           sorting-associated protein, putative [Ricinus communis]
          Length = 3482

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/131 (53%), Positives = 89/131 (67%), Gaps = 6/131 (4%)
 Frame = +1

Query: 1   GRFRPCSSTLCSKPEGWTKMWWQYAQESVLSDVRKRLRKTSWRYLGWRISYRRNYVSLYK 180
           GR+RP   +L  K  GW  +WW YAQESVLSDVR++LRKTSW YLG R++ RR Y++LYK
Sbjct: 306 GRYRPSGHSLSRKQTGWQILWWHYAQESVLSDVRRKLRKTSWGYLGQRLNSRRKYINLYK 365

Query: 181 ---KFIRHAQPVDKDILLEMEQMEKEIDVDDILAYRSIAERESQEFLLSSTLPNVGKYS- 348
               F++  Q +D+ I  E+EQMEKE D+DDIL YRS AERE QE L  S+  N+G    
Sbjct: 366 IKLDFLQQEQAIDEFIFRELEQMEKEFDIDDILNYRSAAERELQEVLPDSSASNMGVNGI 425

Query: 349 --AAGKQQNDE 375
             +  K +NDE
Sbjct: 426 DISLKKSRNDE 436


>ref|XP_003571321.1| PREDICTED: uncharacterized protein LOC100822443 [Brachypodium
           distachyon]
          Length = 1505

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/137 (51%), Positives = 97/137 (70%), Gaps = 3/137 (2%)
 Frame = +1

Query: 1   GRFRPCSSTLCSKPEGWTKMWWQYAQESVLSDVRKRLRKTSWRYLGWRISYRRNYVSLYK 180
           GR+RP  S L  + +GW   WW YAQ+S+++DVRKRLRKTSWR+LG R+ YRR YV+LY+
Sbjct: 310 GRYRPPQSFLSKRHKGWRIRWWHYAQDSIIADVRKRLRKTSWRFLGQRLGYRRKYVNLYR 369

Query: 181 ---KFIRHAQPVDKDILLEMEQMEKEIDVDDILAYRSIAERESQEFLLSSTLPNVGKYSA 351
              + ++  Q V KDIL ++E ++KE D+DDI+ YR+IAE++ QE L+ ST  N   +S+
Sbjct: 370 TKLELLQKGQLVSKDILQQLEILDKECDIDDIVNYRTIAEQQLQE-LVKSTKDN---FSS 425

Query: 352 AGKQQNDEGSSAKAQRG 402
            G  Q+DE  SA A RG
Sbjct: 426 PGSPQSDE-QSAGAGRG 441


>ref|NP_001060855.1| Os08g0116700 [Oryza sativa Japonica Group]
           gi|50725626|dbj|BAD33093.1| VPS13-like protein [Oryza
           sativa Japonica Group] gi|113622824|dbj|BAF22769.1|
           Os08g0116700 [Oryza sativa Japonica Group]
          Length = 539

 Score =  131 bits (329), Expect = 7e-29
 Identities = 65/135 (48%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
 Frame = +1

Query: 1   GRFRPCSSTLCSKPEGWTKMWWQYAQESVLSDVRKRLRKTSWRYLGWRISYRRNYVSLYK 180
           GR+RP  S+L  + +GW +MWW YAQ SVL+DVR+ LRKTSW YLG R+  RR YV+ Y+
Sbjct: 309 GRYRPSQSSLSKRHKGWQRMWWHYAQRSVLADVRRELRKTSWNYLGQRLDCRRKYVNFYR 368

Query: 181 ---KFIRHAQPVDKDILLEMEQMEKEIDVDDILAYRSIAERESQEFLLSSTLPNVGKYSA 351
              + ++  Q V +DIL E+E M++E D+DDIL YR+IAE++ QE L+ ST  N   +S+
Sbjct: 369 MKLELLQKGQLVSEDILQELENMDREGDIDDILNYRTIAEQKLQEALVKSTKDN---FSS 425

Query: 352 AGKQQNDEGSSAKAQ 396
            G  + D+ S+   Q
Sbjct: 426 PGSPRIDDQSAGAGQ 440


Top