BLASTX nr result
ID: Cimicifuga21_contig00031975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00031975
(354 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635316.1| PREDICTED: putative ribonuclease H protein A... 53 4e-17
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera] 52 1e-16
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 52 1e-16
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 52 1e-16
emb|CAN69275.1| hypothetical protein VITISV_001683 [Vitis vinifera] 54 1e-16
>ref|XP_003635316.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Vitis
vinifera]
Length = 418
Score = 52.8 bits (125), Expect(3) = 4e-17
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -1
Query: 342 LASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
LA++L C +GSLPT YLGLPL A YK + V + V E F K+L KR S+G
Sbjct: 127 LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKRQYFSKG 179
Score = 47.4 bits (111), Expect(3) = 4e-17
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3
Query: 136 LFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCTSKE 2
LF+F IP + +LE + R FLWG + K HLV WK +C K+
Sbjct: 197 LFLFVIPKRVCVRLEKIQRDFLWGGGALENKPHLVSWKVVCADKK 241
Score = 32.3 bits (72), Expect(3) = 4e-17
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L YF+
Sbjct: 172 KRQYFSKGGRLTLLKSTLSSLPTYFL 197
>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
Length = 1905
Score = 52.0 bits (123), Expect(3) = 1e-16
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -1
Query: 342 LASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
LA++L C +GSLPT YLGLPL A YK + V + V E F K+L KR S+G
Sbjct: 1432 LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKRQYLSKG 1484
Score = 46.6 bits (109), Expect(3) = 1e-16
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3
Query: 136 LFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCTSKE 2
L +F IP + +LE + R FLWG +KK HLV WK +C K+
Sbjct: 1502 LSLFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKAVCADKK 1546
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L YF+
Sbjct: 1477 KRQYLSKGGRLTLLKSTLSSLPTYFL 1502
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 52.0 bits (123), Expect(3) = 1e-16
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -1
Query: 342 LASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
LA++L C +GSLPT YLGLPL A YK + V + V E F K+L KR S+G
Sbjct: 3144 LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKRQYLSKG 3196
Score = 46.2 bits (108), Expect(3) = 1e-16
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3
Query: 136 LFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCTSKE 2
L +F IP + +LE + R FLWG +KK HLV WK +C K+
Sbjct: 3214 LSLFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKVVCADKK 3258
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L YF+
Sbjct: 3189 KRQYLSKGGRLTLLKSTLSSLPTYFL 3214
Score = 44.3 bits (103), Expect(3) = 2e-13
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 151 ISVSILFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCT 11
+ + ++ +F IP + ++E + R FLWG +KK HLV W +CT
Sbjct: 1471 LPIYLMSLFVIPRKVCARIEKIQRDFLWGGGALEKKPHLVNWSAVCT 1517
Score = 43.1 bits (100), Expect(3) = 2e-13
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = -1
Query: 354 HILDLASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
++ ++ S+L C +G+LP+ YLGLPL A +K V + V E F K L KR S+G
Sbjct: 1402 YLENIVSVLGCRIGNLPSSYLGLPLGAPFKSPRVWDVVEERFRKCLSLWKRQYLSKG 1458
Score = 32.0 bits (71), Expect(3) = 2e-13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L IY +
Sbjct: 1451 KRQYLSKGGRLTLIKSTLSSLPIYLM 1476
>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
Length = 1728
Score = 52.0 bits (123), Expect(3) = 1e-16
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -1
Query: 342 LASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
LA++L C +GSLPT YLGLPL A YK + V + V E F K+L KR S+G
Sbjct: 824 LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRKRLSLWKRQYLSKG 876
Score = 46.2 bits (108), Expect(3) = 1e-16
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -3
Query: 136 LFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCTSKE 2
L +F IP + +LE + R FLWG +KK HLV WK +C K+
Sbjct: 894 LSLFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKVVCADKK 938
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L YF+
Sbjct: 869 KRQYLSKGGRLTLLKSTLSSLPTYFL 894
>emb|CAN69275.1| hypothetical protein VITISV_001683 [Vitis vinifera]
Length = 706
Score = 53.5 bits (127), Expect(3) = 1e-16
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = -1
Query: 342 LASILSCLVGSLPTRYLGLPLEANYKKVDV*NPVIELFDKKLGG*KRGLHSRG 184
LAS+L C +GSLPT YLGLPL A+YK + V + V E F K+L KR S+G
Sbjct: 49 LASVLGCKIGSLPTSYLGLPLGASYKSLRVWDAVEERFRKRLSLWKRQYLSKG 101
Score = 44.7 bits (104), Expect(3) = 1e-16
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3
Query: 136 LFIFTIPVSMATKLESMMRYFLWGSNE*KKKIHLVKWKNMCTSKE 2
L +F IP + +LE + R FLWG + K HLV WK +C +K+
Sbjct: 119 LSLFVIPKRVCARLEKIQRDFLWGDGALENKPHLVSWKVICATKK 163
Score = 32.3 bits (72), Expect(3) = 1e-16
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 209 RREVSIQGGRLTLTKSTLSNLRIYFV 132
+R+ +GGRLTL KSTLS+L YF+
Sbjct: 94 KRQYLSKGGRLTLLKSTLSSLPTYFL 119