BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031973
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893907.1| predicted protein [Arabidopsis lyrata subsp....    60   1e-07
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    57   2e-06

>ref|XP_002893907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339749|gb|EFH70166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 110

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +3

Query: 3   GLCVFWKSDVFSVQVLFSDVWIIHLGLVVNEISCFLSCVYANCTYSIRRTQWDSMASQLQ 182
           GL +FWK D ++V++LFSD  II   + +  +  ++SCVY +    +R+  WD +     
Sbjct: 17  GLALFWK-DSYNVEILFSDSRIIDAKVKLGSLIFYISCVYGDPVAHLRQIVWDKLIDISV 75

Query: 183 ISSDCPWMVCGDLNDIGLVVEKKVGTLQV 269
           + +D PW+V GDLN+I    EK  G  +V
Sbjct: 76  LRND-PWLVLGDLNEIMNNSEKLGGPARV 103


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/85 (35%), Positives = 48/85 (56%)
 Frame = +3

Query: 3   GLCVFWKSDVFSVQVLFSDVWIIHLGLVVNEISCFLSCVYANCTYSIRRTQWDSMASQLQ 182
           GL V+WK  + S+QV+  DV ++ L +     + +LSC+Y +   S R   W+ +  ++ 
Sbjct: 429 GLVVYWKKHL-SIQVISHDVRLVDLYVEYKNFNFYLSCIYGHPIPSERHHLWEKL-QRVS 486

Query: 183 ISSDCPWMVCGDLNDIGLVVEKKVG 257
                PWM+CGD N+I  + EKK G
Sbjct: 487 AHRSGPWMMCGDFNEILNLNEKKGG 511