BLASTX nr result

ID: Cimicifuga21_contig00031972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031972
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ric...   220   8e-56
ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-lik...   214   6e-54
emb|CBI28885.3| unnamed protein product [Vitis vinifera]              214   6e-54
ref|XP_002885761.1| hypothetical protein ARALYDRAFT_480096 [Arab...   212   3e-53
ref|XP_004143231.1| PREDICTED: lipid-A-disaccharide synthase-lik...   208   3e-52

>ref|XP_002528957.1| Lipid-A-disaccharide synthase, putative [Ricinus communis]
           gi|223531603|gb|EEF33431.1| Lipid-A-disaccharide
           synthase, putative [Ricinus communis]
          Length = 469

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/141 (75%), Positives = 119/141 (84%)
 Frame = +1

Query: 1   EVSGDSIASRLMASLKKLSPSPIHFYGVGGSLMSKEGLRSLFPMEDITVMGIWELLPHLI 180
           EVSGDSI SRLMASLK LSP+PI F GVGG +MSKEGL+SLFPMEDI VMGIWELLPHL 
Sbjct: 54  EVSGDSIGSRLMASLKNLSPTPIRFAGVGGFMMSKEGLKSLFPMEDIAVMGIWELLPHLN 113

Query: 181 KLKAKLKVATEAALSFQPHVVVTVDSKGFSFRLLRQLRARCNREGPSKPLHIHYVAPSFW 360
           K + +LK  TEAA SF PHVVVTVDSKGFSFRLL+QLRAR +++  + P+H HYVAPSFW
Sbjct: 114 KFRERLKETTEAAFSFLPHVVVTVDSKGFSFRLLKQLRARYSQQRLNSPVHFHYVAPSFW 173

Query: 361 AWKGGEARLKGLSEFVDHVLC 423
           AWKGGE RLK L+ FVDHV C
Sbjct: 174 AWKGGEERLKNLANFVDHVFC 194


>ref|XP_003633287.1| PREDICTED: lipid-A-disaccharide synthase-like [Vitis vinifera]
          Length = 460

 Score =  214 bits (545), Expect = 6e-54
 Identities = 102/141 (72%), Positives = 118/141 (83%)
 Frame = +1

Query: 1   EVSGDSIASRLMASLKKLSPSPIHFYGVGGSLMSKEGLRSLFPMEDITVMGIWELLPHLI 180
           EVSGD+I SRLMASLK +SP PI F GVGG +MSK+GL+ LFPMEDI VMGIWELLPHL 
Sbjct: 44  EVSGDTIGSRLMASLKGISPFPIRFAGVGGPMMSKQGLKPLFPMEDIAVMGIWELLPHLN 103

Query: 181 KLKAKLKVATEAALSFQPHVVVTVDSKGFSFRLLRQLRARCNREGPSKPLHIHYVAPSFW 360
           K + +LK   EAA  FQPHVV+T+DSKGFSFR L+QLRAR +++G   P+H H+VAPSFW
Sbjct: 104 KFRMRLKETIEAAFLFQPHVVLTIDSKGFSFRFLKQLRARYSQQGLVSPVHHHFVAPSFW 163

Query: 361 AWKGGEARLKGLSEFVDHVLC 423
           AWKGGEARLKGL+EFVDHV C
Sbjct: 164 AWKGGEARLKGLTEFVDHVFC 184


>emb|CBI28885.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  214 bits (545), Expect = 6e-54
 Identities = 102/141 (72%), Positives = 118/141 (83%)
 Frame = +1

Query: 1   EVSGDSIASRLMASLKKLSPSPIHFYGVGGSLMSKEGLRSLFPMEDITVMGIWELLPHLI 180
           EVSGD+I SRLMASLK +SP PI F GVGG +MSK+GL+ LFPMEDI VMGIWELLPHL 
Sbjct: 16  EVSGDTIGSRLMASLKGISPFPIRFAGVGGPMMSKQGLKPLFPMEDIAVMGIWELLPHLN 75

Query: 181 KLKAKLKVATEAALSFQPHVVVTVDSKGFSFRLLRQLRARCNREGPSKPLHIHYVAPSFW 360
           K + +LK   EAA  FQPHVV+T+DSKGFSFR L+QLRAR +++G   P+H H+VAPSFW
Sbjct: 76  KFRMRLKETIEAAFLFQPHVVLTIDSKGFSFRFLKQLRARYSQQGLVSPVHHHFVAPSFW 135

Query: 361 AWKGGEARLKGLSEFVDHVLC 423
           AWKGGEARLKGL+EFVDHV C
Sbjct: 136 AWKGGEARLKGLTEFVDHVFC 156


>ref|XP_002885761.1| hypothetical protein ARALYDRAFT_480096 [Arabidopsis lyrata subsp.
           lyrata] gi|297331601|gb|EFH62020.1| hypothetical protein
           ARALYDRAFT_480096 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  212 bits (539), Expect = 3e-53
 Identities = 101/142 (71%), Positives = 120/142 (84%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1   EVSGDSIASRLMASLKKLSPSPIHFYGVGGSLMSKEGLRSLFPMEDITVMGIWELLPHLI 180
           EVSGD+I SRLM+SLKKLSP P+ F GVGGSLM K+GL SLFPMED+ VMG+WELLPHL 
Sbjct: 47  EVSGDNIGSRLMSSLKKLSPLPLRFNGVGGSLMCKQGLTSLFPMEDLAVMGLWELLPHLY 106

Query: 181 KLKAKLKVATEAALSFQPHVVVTVDSKGFSFRLLRQLRARCNREG-PSKPLHIHYVAPSF 357
           K + KLK   +AA+ F+PH+VVTVDSKGFSFRLL++LRAR N++   + P+H HYVAPSF
Sbjct: 107 KFRVKLKETIDAAVKFKPHIVVTVDSKGFSFRLLKELRARYNQQRLENCPVHFHYVAPSF 166

Query: 358 WAWKGGEARLKGLSEFVDHVLC 423
           WAWKGGE+RL GLSEFVDH+ C
Sbjct: 167 WAWKGGESRLGGLSEFVDHLFC 188


>ref|XP_004143231.1| PREDICTED: lipid-A-disaccharide synthase-like [Cucumis sativus]
          Length = 459

 Score =  208 bits (530), Expect = 3e-52
 Identities = 101/141 (71%), Positives = 115/141 (81%)
 Frame = +1

Query: 1   EVSGDSIASRLMASLKKLSPSPIHFYGVGGSLMSKEGLRSLFPMEDITVMGIWELLPHLI 180
           EVSGD+IASRLMASL+ LSP P++F GVGG +MSK+GL SLF MEDI VMGIWEL  HL 
Sbjct: 39  EVSGDTIASRLMASLRTLSPVPVNFSGVGGPMMSKQGLTSLFLMEDIAVMGIWELFSHLK 98

Query: 181 KLKAKLKVATEAALSFQPHVVVTVDSKGFSFRLLRQLRARCNREGPSKPLHIHYVAPSFW 360
            ++ KLK   EAA+ F+PHV+VTVDSKGFSFRLL+Q+RAR  R     PLH HYVAPSFW
Sbjct: 99  SIREKLKRTVEAAIVFEPHVIVTVDSKGFSFRLLKQIRARYRRYKMDGPLHFHYVAPSFW 158

Query: 361 AWKGGEARLKGLSEFVDHVLC 423
           AWKGGE RLKGL EFVDH+LC
Sbjct: 159 AWKGGEERLKGLVEFVDHILC 179


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