BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031967
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99101.1| retrotransposon protein, putative, Ty3-gypsy subc...   208   4e-52
gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subc...   207   6e-52
dbj|BAH80026.1| putative retrotransposon protein [Oryza sativa I...   207   9e-52
emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]           207   9e-52
emb|CAH67149.1| OSIGBa0122F23.6 [Oryza sativa Indica Group]           207   9e-52

>gb|ABA99101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1550

 Score =  208 bits (529), Expect = 4e-52
 Identities = 100/148 (67%), Positives = 116/148 (78%)
 Frame = -1

Query: 444  EHQKPYGLLQYLPIPIWK*EEISMDFIDGLPRTQKGNEAIWVVVDRLTKTAHFILMKSTR 265
            EHQKP GLLQ L IP WK EEI MDFI GLPRT  G+++IWV+VDRLTK AHFIL+++T 
Sbjct: 1312 EHQKPAGLLQPLKIPEWKWEEIEMDFITGLPRTSSGHDSIWVIVDRLTKVAHFILVRTTY 1371

Query: 264  TTSDLVRLFIDQIVKYHGVPRNIVSDRDPLFTSAFWMSFQSAMQTDLAMSTAYHPQTDGQ 85
            + S L  L++ +IV  HGVP+ IVSDRD  FTS FW   Q  M + L  STAYHPQTDGQ
Sbjct: 1372 SGSRLAELYMARIVCLHGVPKKIVSDRDSQFTSKFWKKLQEEMGSKLNFSTAYHPQTDGQ 1431

Query: 84   TERVNQVLEDMLRACVLDFGGSWEKHLP 1
            TERVNQ+LEDMLRAC LDFGGSW+K+LP
Sbjct: 1432 TERVNQILEDMLRACALDFGGSWDKNLP 1459


>gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1643

 Score =  207 bits (528), Expect = 6e-52
 Identities = 101/148 (68%), Positives = 115/148 (77%)
 Frame = -1

Query: 444  EHQKPYGLLQYLPIPIWK*EEISMDFIDGLPRTQKGNEAIWVVVDRLTKTAHFILMKSTR 265
            EHQKP GLLQ L IP WK EEI MDFI GLPRT  G+++IWVVVDRLTK AHFI +K+T 
Sbjct: 1261 EHQKPAGLLQLLKIPEWKWEEIGMDFITGLPRTSTGHDSIWVVVDRLTKVAHFIPVKTTY 1320

Query: 264  TTSDLVRLFIDQIVKYHGVPRNIVSDRDPLFTSAFWMSFQSAMQTDLAMSTAYHPQTDGQ 85
            T   L  L++ ++V  HGVP+ IVSDR   FTS FW   QS + T L  STAYHPQTDGQ
Sbjct: 1321 TGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQ 1380

Query: 84   TERVNQVLEDMLRACVLDFGGSWEKHLP 1
            TERVNQ+LEDMLRACVLDFGGSW+K+LP
Sbjct: 1381 TERVNQILEDMLRACVLDFGGSWDKNLP 1408


>dbj|BAH80026.1| putative retrotransposon protein [Oryza sativa Indica Group]
          Length = 1666

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/148 (68%), Positives = 115/148 (77%)
 Frame = -1

Query: 444  EHQKPYGLLQYLPIPIWK*EEISMDFIDGLPRTQKGNEAIWVVVDRLTKTAHFILMKSTR 265
            EHQKP GLLQ L IP WK EEI MDFI GLPRT  G+++IWVVVDRLTK AHFI +K+T 
Sbjct: 1287 EHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTY 1346

Query: 264  TTSDLVRLFIDQIVKYHGVPRNIVSDRDPLFTSAFWMSFQSAMQTDLAMSTAYHPQTDGQ 85
            T   L  L++ ++V  HGVP+ IVSDR   FTS FW   QS + T L  STAYHPQTDGQ
Sbjct: 1347 TGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQ 1406

Query: 84   TERVNQVLEDMLRACVLDFGGSWEKHLP 1
            TERVNQ+LEDMLRACVLDFGGSW+K+LP
Sbjct: 1407 TERVNQILEDMLRACVLDFGGSWDKNLP 1434


>emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]
          Length = 1741

 Score =  207 bits (526), Expect = 9e-52
 Identities = 100/148 (67%), Positives = 116/148 (78%)
 Frame = -1

Query: 444  EHQKPYGLLQYLPIPIWK*EEISMDFIDGLPRTQKGNEAIWVVVDRLTKTAHFILMKSTR 265
            EHQKP GLLQ L IP WK EEI MDFI GLPRT  G+++IWV+VDRLTK AHFIL+K+T 
Sbjct: 1362 EHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFILVKTTY 1421

Query: 264  TTSDLVRLFIDQIVKYHGVPRNIVSDRDPLFTSAFWMSFQSAMQTDLAMSTAYHPQTDGQ 85
            + S L +L++ +IV  HGVP+ IVSDR   FTS FW   Q  M + L  STAYHPQTDGQ
Sbjct: 1422 SGSRLAKLYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQ 1481

Query: 84   TERVNQVLEDMLRACVLDFGGSWEKHLP 1
            TERVNQ+LEDMLRAC LDFGGSW+K+LP
Sbjct: 1482 TERVNQILEDMLRACALDFGGSWDKNLP 1509


>emb|CAH67149.1| OSIGBa0122F23.6 [Oryza sativa Indica Group]
          Length = 1346

 Score =  207 bits (526), Expect = 9e-52
 Identities = 101/148 (68%), Positives = 115/148 (77%)
 Frame = -1

Query: 444  EHQKPYGLLQYLPIPIWK*EEISMDFIDGLPRTQKGNEAIWVVVDRLTKTAHFILMKSTR 265
            EHQKP GLLQ L IP WK EEI MDFI GLPRT  G+++IWVVVDRLTK AHFI +K+T 
Sbjct: 967  EHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTY 1026

Query: 264  TTSDLVRLFIDQIVKYHGVPRNIVSDRDPLFTSAFWMSFQSAMQTDLAMSTAYHPQTDGQ 85
            T   L  L++ ++V  HGVP+ IVSDR   FTS FW   QS + T L  STAYHPQTDGQ
Sbjct: 1027 TGHKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQSELGTRLNFSTAYHPQTDGQ 1086

Query: 84   TERVNQVLEDMLRACVLDFGGSWEKHLP 1
            TERVNQ+LEDMLRACVLDFGGSW+K+LP
Sbjct: 1087 TERVNQILEDMLRACVLDFGGSWDKNLP 1114