BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031948
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   229   2e-58
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
gb|ABK93461.1| unknown [Populus trichocarpa]                          213   1e-53
ref|XP_003625195.1| tRNA-splicing endonuclease subunit Sen2-2 [M...   203   1e-50
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   203   1e-50

>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score =  229 bits (584), Expect = 2e-58
 Identities = 108/170 (63%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
 Frame = -2

Query: 520 PIVTTNKDTYWYELSLEEAFYLCHSLNCFKIVRKNQPFKTNDELWESMKSERELFLISYK 341
           P++T  KD  W++LS+EEAFYLCHSL C KIV ++   K ++ELW+ MKS RE F   Y 
Sbjct: 64  PVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETFPDFYM 123

Query: 340 AYSHLRAKNWVVRSGVQYGVDFVAYRHHPSLVHSEYTVILL-EGNGDRNTRLLAWPDVHA 164
           AYSHLR KNWVVRSG QYGVDFVAYRHHP+LVHSEY V++L E N + N RL  W D   
Sbjct: 124 AYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENANGRLRVWSDFDC 183

Query: 163 TVRLEGGVAKTLLVLHINKNGHDAVSSSCLKQYTVEEQTVTRWNSEQGRE 14
           T+RL G VAKTLLV+HINKNGH A +  CLK+Y+VEE+T+TRW++EQ RE
Sbjct: 184 TIRLCGSVAKTLLVIHINKNGHGATTPLCLKKYSVEERTITRWSAEQCRE 233


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  213 bits (543), Expect = 1e-53
 Identities = 102/171 (59%), Positives = 129/171 (75%)
 Frame = -2

Query: 520 PIVTTNKDTYWYELSLEEAFYLCHSLNCFKIVRKNQPFKTNDELWESMKSERELFLISYK 341
           PI+T  K+  W++L LEEAFYLC+SL C KI  ++   K + +LW  MK ++E F   YK
Sbjct: 64  PIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYK 123

Query: 340 AYSHLRAKNWVVRSGVQYGVDFVAYRHHPSLVHSEYTVILLEGNGDRNTRLLAWPDVHAT 161
           AYSHLR KNWV+R G+QYGVDFVAY+HHPSLVHSEY VI+L   GD   RL  W D H T
Sbjct: 124 AYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTG-RLRVWSDFHCT 181

Query: 160 VRLEGGVAKTLLVLHINKNGHDAVSSSCLKQYTVEEQTVTRWNSEQGREDK 8
           +RL G VAKTLL+L+++KNGH A+S SCL++Y+VEE T+TRW+ EQ R+DK
Sbjct: 182 IRLCGSVAKTLLILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDDK 232


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  213 bits (543), Expect = 1e-53
 Identities = 102/171 (59%), Positives = 129/171 (75%)
 Frame = -2

Query: 520 PIVTTNKDTYWYELSLEEAFYLCHSLNCFKIVRKNQPFKTNDELWESMKSERELFLISYK 341
           PI+T  K+  W++L LEEAFYLC+SL C KI  ++   K + +LW  MK ++E F   YK
Sbjct: 64  PIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDFYK 123

Query: 340 AYSHLRAKNWVVRSGVQYGVDFVAYRHHPSLVHSEYTVILLEGNGDRNTRLLAWPDVHAT 161
           AYSHLR KNWV+R G+QYGVDFVAY+HHPSLVHSEY VI+L   GD   RL  W D H T
Sbjct: 124 AYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVL-SEGDTG-RLRVWSDFHCT 181

Query: 160 VRLEGGVAKTLLVLHINKNGHDAVSSSCLKQYTVEEQTVTRWNSEQGREDK 8
           +RL G VAKTLL+L+++KNGH A+S SCL++Y+VEE T+TRW+ EQ R+DK
Sbjct: 182 IRLCGSVAKTLLILNVDKNGHGAISPSCLERYSVEECTITRWSPEQSRDDK 232


>ref|XP_003625195.1| tRNA-splicing endonuclease subunit Sen2-2 [Medicago truncatula]
           gi|124360132|gb|ABN08148.1| tRNA intron endonuclease,
           catalytic C-terminal [Medicago truncatula]
           gi|355500210|gb|AES81413.1| tRNA-splicing endonuclease
           subunit Sen2-2 [Medicago truncatula]
          Length = 246

 Score =  203 bits (517), Expect = 1e-50
 Identities = 99/174 (56%), Positives = 125/174 (71%), Gaps = 5/174 (2%)
 Frame = -2

Query: 520 PIVTTNKDTYWYELSLEEAFYLCHSLNCFKI---VRKNQPFKTNDELWESMKSERELFLI 350
           P+    KD YW++L++EEAFYLC+SL C KI   V  +     ++ELW   +S++E F  
Sbjct: 70  PVRIVEKDMYWFQLTVEEAFYLCYSLKCLKIKINVGADTGPLNDEELWHYFRSKKETFPY 129

Query: 349 SYKAYSHLRAKNWVVRSGVQYGVDFVAYRHHPSLVHSEYTVILL--EGNGDRNTRLLAWP 176
            YKAYSHLR KNWVVRSG QYGVD + YRHHP+ VHSEY V++L  + +GD N RL  W 
Sbjct: 130 FYKAYSHLRMKNWVVRSGAQYGVDLIVYRHHPARVHSEYGVLVLSHDKDGDLNGRLRVWS 189

Query: 175 DVHATVRLEGGVAKTLLVLHINKNGHDAVSSSCLKQYTVEEQTVTRWNSEQGRE 14
           DVH T RL GGVAKTLLVL++NKNG++  S  CL  YTVEE+T++RW+ EQ RE
Sbjct: 190 DVHCTTRLLGGVAKTLLVLYVNKNGNNDESLLCLTNYTVEERTISRWSPEQCRE 243


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/170 (58%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
 Frame = -2

Query: 520 PIVTTNKDTYWYELSLEEAFYLCHSLNCFKIVRKNQPFKTNDELWESMKSERELFLISYK 341
           P++T+ KD  W++L +EEAFYL +SL C KIV ++    ++ ELW+ MKS++  F   YK
Sbjct: 64  PMITSEKDKQWFQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQFMKSQKPTFPDFYK 123

Query: 340 AYSHLRAKNWVVRSGVQYGVDFVAYRHHPSLVHSEYTVILL-EGNGDRNTRLLAWPDVHA 164
           AYSHLR KNWVVR G QYGVDFVAYRHHPSLVHSEY V++L E + + N RL  W D H 
Sbjct: 124 AYSHLRMKNWVVRPGSQYGVDFVAYRHHPSLVHSEYAVLVLSEEDANANGRLRVWSDFHC 183

Query: 163 TVRLEGGVAKTLLVLHINKNGHDAVSSSCLKQYTVEEQTVTRWNSEQGRE 14
           T+RL G VAKTLLVL INKN H     SCL++Y+VEE+T  RW+ +Q RE
Sbjct: 184 TLRLCGSVAKTLLVLGINKNCHGTTLPSCLEKYSVEERTFARWSPQQSRE 233