BLASTX nr result

ID: Cimicifuga21_contig00031942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031942
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing pro...    95   5e-18
ref|XP_003526432.1| PREDICTED: coiled-coil domain-containing pro...    82   5e-14
ref|XP_004138747.1| PREDICTED: coiled-coil domain-containing pro...    79   5e-13
ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arab...    75   7e-12

>ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing protein 93 [Vitis
           vinifera] gi|296081986|emb|CBI20991.3| unnamed protein
           product [Vitis vinifera]
          Length = 304

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/87 (57%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
 Frame = +2

Query: 5   SCMQ-NHSNLQADVVQLEKKISSYNEDKGSFDDFNQFLCDSLEKLNSAKSDLAVKLREVI 181
           SC +  HS L+A+VV LE+K++S N  +   + F++FL + LE+LN+AK +LA +LR ++
Sbjct: 96  SCHEAKHSKLKAEVVDLEEKVASGNGSESISNGFDKFLHNCLEELNAAKRELAGRLRAIL 155

Query: 182 SLKRQLDDVPSQSELIQYERRSSELYV 262
            LKRQLDDVPSQ+ELIQYERR SELYV
Sbjct: 156 LLKRQLDDVPSQTELIQYERRFSELYV 182


>ref|XP_003526432.1| PREDICTED: coiled-coil domain-containing protein 93-like [Glycine
           max]
          Length = 252

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/82 (46%), Positives = 60/82 (73%)
 Frame = +2

Query: 20  HSNLQADVVQLEKKISSYNEDKGSFDDFNQFLCDSLEKLNSAKSDLAVKLREVISLKRQL 199
           HS LQ D+ +LE+KI++ ++++   D+ +    + +EK+N  K  LA +LR+++ L+RQ+
Sbjct: 59  HSELQDDISELERKITNDSDNENLPDELHHSFGELVEKVNLMKKQLAARLRDIVVLRRQI 118

Query: 200 DDVPSQSELIQYERRSSELYVQ 265
           DD+P QSE+IQYERR SELY Q
Sbjct: 119 DDLPCQSEVIQYERRLSELYAQ 140


>ref|XP_004138747.1| PREDICTED: coiled-coil domain-containing protein 93-like [Cucumis
           sativus]
          Length = 300

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/86 (45%), Positives = 58/86 (67%)
 Frame = +2

Query: 2   SSCMQNHSNLQADVVQLEKKISSYNEDKGSFDDFNQFLCDSLEKLNSAKSDLAVKLREVI 181
           S+C    S LQ ++++L  +++  +E    FD  +  +  S E+L+S K  LA+ +RE +
Sbjct: 92  STCNSKRSELQDEIIELGGRLTEDHECLNFFDSLDDLISASEEELDSVKKALALSVRETL 151

Query: 182 SLKRQLDDVPSQSELIQYERRSSELY 259
           +LKR LDDVP+Q+ELIQYERR SELY
Sbjct: 152 ALKRLLDDVPTQTELIQYERRFSELY 177


>ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|222855567|gb|EEE93114.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/78 (50%), Positives = 59/78 (75%)
 Frame = +2

Query: 23  SNLQADVVQLEKKISSYNEDKGSFDDFNQFLCDSLEKLNSAKSDLAVKLREVISLKRQLD 202
           + L+A+V  LE+KI++  + +G   D +  L +SLEKLN+AK +LA +LR V+S+KR+L 
Sbjct: 95  TELEAEVCNLEEKIAAGMDSEGLCKDLDCLLSESLEKLNAAKKELAARLRAVMSVKRKLG 154

Query: 203 DVPSQSELIQYERRSSEL 256
           +VP+QSELIQYER  S++
Sbjct: 155 EVPTQSELIQYERGFSDV 172


>ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arabidopsis lyrata subsp.
           lyrata] gi|297315099|gb|EFH45522.1| hypothetical protein
           ARALYDRAFT_491462 [Arabidopsis lyrata subsp. lyrata]
          Length = 310

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = +2

Query: 2   SSCMQNHSNLQADVVQLEKKISSYNEDKGSFDDFNQFLCDSLEKLNSAKSDLAVKLREVI 181
           S+C +  S L+  V  LE++++   + +   +D +  L +SL+ L SAK +LA  LRE++
Sbjct: 93  SNCKR--SALEDAVHGLEERVAKGLDGEIHEEDLDGLLFESLDNLTSAKKELAAALREIV 150

Query: 182 SLKRQLDDVPSQSELIQYERRSSELYV 262
           SLKRQ+DDVP QSEL+QYERR SEL V
Sbjct: 151 SLKRQIDDVPCQSELLQYERRFSELNV 177


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