BLASTX nr result

ID: Cimicifuga21_contig00031941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031941
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527268.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-contai...    92   4e-17
emb|CBI29719.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002321235.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-contai...    85   5e-15

>ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
           gi|223533361|gb|EEF35112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 458

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/88 (54%), Positives = 59/88 (67%)
 Frame = -3

Query: 432 GITSDSEGLSDIFETDSDEEVEEKAERPLYLDEFEKXXXXXXXXXXXXXEHLRQISFNEK 253
           G+ SDSE LSDIFETDSD E E+K +RPLYL+EF+K             EHLRQ+S + +
Sbjct: 366 GMLSDSEDLSDIFETDSDTETEDKVKRPLYLEEFKKFPIQGNEEPEDFEEHLRQLSVDSR 425

Query: 252 KAGQVKKGVDLPDLDEVDRIFLRAGSLL 169
           K    +K  D+P  DEVDR+FLRA SLL
Sbjct: 426 KVESSEKDSDIPSFDEVDRLFLRAASLL 453


>ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Vitis vinifera]
          Length = 401

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/90 (55%), Positives = 62/90 (68%)
 Frame = -3

Query: 438 ESGITSDSEGLSDIFETDSDEEVEEKAERPLYLDEFEKXXXXXXXXXXXXXEHLRQISFN 259
           +SG  S SE LSDIFE+DSD + +EKAE+ LYL+EFEK             EHLRQIS +
Sbjct: 307 DSGTESCSEALSDIFESDSDTDTKEKAEQLLYLNEFEKFPVESDGEPEDFEEHLRQISAD 366

Query: 258 EKKAGQVKKGVDLPDLDEVDRIFLRAGSLL 169
            +KA  ++K  DLP LDEVD++FLRA SLL
Sbjct: 367 SRKAKSLEKDADLPQLDEVDQMFLRAASLL 396


>emb|CBI29719.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/90 (55%), Positives = 62/90 (68%)
 Frame = -3

Query: 438 ESGITSDSEGLSDIFETDSDEEVEEKAERPLYLDEFEKXXXXXXXXXXXXXEHLRQISFN 259
           +SG  S SE LSDIFE+DSD + +EKAE+ LYL+EFEK             EHLRQIS +
Sbjct: 237 DSGTESCSEALSDIFESDSDTDTKEKAEQLLYLNEFEKFPVESDGEPEDFEEHLRQISAD 296

Query: 258 EKKAGQVKKGVDLPDLDEVDRIFLRAGSLL 169
            +KA  ++K  DLP LDEVD++FLRA SLL
Sbjct: 297 SRKAKSLEKDADLPQLDEVDQMFLRAASLL 326


>ref|XP_002321235.1| predicted protein [Populus trichocarpa] gi|222862008|gb|EEE99550.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/96 (54%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
 Frame = -3

Query: 432 GITSDSEGLSDIFETDSDEEVEEKAERPLYLDEFEKXXXXXXXXXXXXXEHLRQISFNEK 253
           GI SDSE LSDIFETDSD + EE ++RPLYL+EFEK             EHLRQIS   K
Sbjct: 313 GIASDSEDLSDIFETDSDADTEETSKRPLYLEEFEKFSVEADGEPEDFEEHLRQISLGSK 372

Query: 252 KAGQVKKGVDL--------PDLDEVDRIFLRAGSLL 169
           K     K VD+        P  DEVDR+FLRA SLL
Sbjct: 373 KGVTSGKDVDIPTGVDVDSPSFDEVDRMFLRAASLL 408


>ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Cucumis sativus]
           gi|449516505|ref|XP_004165287.1| PREDICTED:
           uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Cucumis sativus]
          Length = 500

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/90 (47%), Positives = 60/90 (66%)
 Frame = -3

Query: 438 ESGITSDSEGLSDIFETDSDEEVEEKAERPLYLDEFEKXXXXXXXXXXXXXEHLRQISFN 259
           ++G++SDSE LSD+FETD D E +EK E+PL+L EFE              + LRQIS +
Sbjct: 406 DTGMSSDSEDLSDMFETDIDSEADEKMEKPLFLKEFENFAAETEDEIEDLSDQLRQISMD 465

Query: 258 EKKAGQVKKGVDLPDLDEVDRIFLRAGSLL 169
            K+A  ++  V+ P+ DEVDR+FLR+ SLL
Sbjct: 466 SKQAKILENDVNSPEFDEVDRLFLRSASLL 495


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