BLASTX nr result

ID: Cimicifuga21_contig00031916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031916
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245...    61   1e-07
ref|XP_002520929.1| bromodomain-containing protein [Ricinus comm...    56   3e-06

>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -2

Query: 460 NPETCWNGLLGQQKPESISTDLNVRFQSPGSPSSKVMVDPPQPDLALQL 314
           +P+  W GL  QQ+ +S+  DLNVRFQSPGSPSS   VD  QPDLALQL
Sbjct: 703 HPQPSWPGLPPQQRQDSVPPDLNVRFQSPGSPSSS-KVDSTQPDLALQL 750


>ref|XP_002520929.1| bromodomain-containing protein [Ricinus communis]
           gi|223539895|gb|EEF41474.1| bromodomain-containing
           protein [Ricinus communis]
          Length = 767

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -2

Query: 439 GLLGQQKPESISTDLNVRFQSPGSPSSKVMVDPPQPDLALQL 314
           GL  QQK +S+  DLNVRFQSPGSPSS   VD  QPDLALQL
Sbjct: 727 GLSPQQKSDSVPPDLNVRFQSPGSPSSN-RVDSAQPDLALQL 767


Top