BLASTX nr result

ID: Cimicifuga21_contig00031898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031898
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15349.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...   101   6e-20
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   100   1e-19
tpg|DAA63541.1| TPA: hypothetical protein ZEAMMB73_114601 [Zea m...    95   5e-18
ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...    91   1e-16

>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  126 bits (317), Expect = 2e-27
 Identities = 68/132 (51%), Positives = 88/132 (66%)
 Frame = -3

Query: 428 MAENEKEIQIRSLSGESTTISIPSNRSIQDLKLLLKLIFTPAKNSPNFHLFFKGAKMXXX 249
           MAE E+EI++RSLSGESTT+SI  N++I+DLKLLL   F PA NSPNFHLFFKGAK+   
Sbjct: 4   MAEREREIEVRSLSGESTTVSISENKTIEDLKLLLIQTFPPASNSPNFHLFFKGAKLSLQ 63

Query: 248 XXXXXXSIEPHDIIVLVPFTKKVGNQHQSKSYDQRSIPPKTSSSVAADSIWSDLMQDLSS 69
                  I     +VLVPFTKKV   +QS +  +  +P ++  S  ADS WSD+MQDL +
Sbjct: 64  SKLNSHPIGSGKFMVLVPFTKKVRQCNQSATTSE--VPNQSPVSNFADSAWSDMMQDLRT 121

Query: 68  LAERNQNTEQVH 33
           L+  + N  Q +
Sbjct: 122 LSNMSNNENQTN 133


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score =  101 bits (252), Expect = 6e-20
 Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
 Frame = -3

Query: 428 MAENEKEIQIRSLSGESTTISIPSNRSIQDLKLLLKLIFTPAKNSPNFHLFFKGAKMXXX 249
           M E+E+EI I++LSG+S T+S+  N SI D+KLLL+  F  A  SPNFHLFFKG K+   
Sbjct: 1   MEESEREISIKTLSGQSLTVSVSGNSSIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQ 60

Query: 248 XXXXXXSIEPHDIIVLVPFTKKVGNQHQSK-SYD-QRSIPPKTSSSVAADSIWSDLMQDL 75
                  I+  + +VL+PF KK  ++ + +  Y+ + S+   TS S  ADS WSD++QDL
Sbjct: 61  SQLSACCIDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDL 120

Query: 74  SSL 66
           S L
Sbjct: 121 SYL 123


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
 Frame = -3

Query: 428 MAENEKEIQIRSLSGESTTISIPSNRSIQDLKLLLKLIFTPAKNSPNFHLFFKGAKMXXX 249
           M E+E+EI I++LSG+S T+S+  N +I D+KLLL+  F  A  SPNFHLFFKG K+   
Sbjct: 1   MEESEREISIKTLSGQSLTVSVSGNSTIDDIKLLLRRNFPSAIISPNFHLFFKGTKLKAQ 60

Query: 248 XXXXXXSIEPHDIIVLVPFTKKVGNQHQSK-SYD-QRSIPPKTSSSVAADSIWSDLMQDL 75
                  I+  + +VL+PF KK  ++ + +  Y+ + S+   TS S  ADS WSD++QDL
Sbjct: 61  SQISACCIDHGEFLVLIPFNKKESSKSRLRDQYELESSVSSGTSISQFADSAWSDMVQDL 120

Query: 74  SSL 66
           S L
Sbjct: 121 SYL 123


>tpg|DAA63541.1| TPA: hypothetical protein ZEAMMB73_114601 [Zea mays]
          Length = 873

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
 Frame = -3

Query: 425 AENE-KEIQIRSLSGESTTISIPSNRSIQDLKLLLKLIFTPAKNSPNFHLFFKGAKMXXX 249
           AE E  E+Q+R+L G ST + +P   S++DLK  L+  F PA+ SP+FHLF KGAK+   
Sbjct: 3   AEQEWSEVQVRALDGRSTVVKLPLGASVRDLKAALRTSFLPAQVSPSFHLFLKGAKLRLD 62

Query: 248 XXXXXXSIEPHDIIVLVPFTKKVGNQH---QSKSYDQRSIPPKTSS-SVAADSIWSDLMQ 81
                 +I   D IVLVPFT +   QH    + S DQ   PPK    S AA+S W D+M 
Sbjct: 63  AEIGSLAIGDGDFIVLVPFT-RTPQQHFSVSTASQDQGHCPPKQPEVSSAANSAWQDIMD 121

Query: 80  DLSSLAERNQN 48
           DLS++    Q+
Sbjct: 122 DLSAMPASPQS 132


>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 55/132 (41%), Positives = 76/132 (57%)
 Frame = -3

Query: 428 MAENEKEIQIRSLSGESTTISIPSNRSIQDLKLLLKLIFTPAKNSPNFHLFFKGAKMXXX 249
           MAE E+EI++RSLSGESTT+SI  N++I+DLKLLL                 +GAK+   
Sbjct: 1   MAEREREIEVRSLSGESTTVSISENKTIEDLKLLLN----------------QGAKLSLQ 44

Query: 248 XXXXXXSIEPHDIIVLVPFTKKVGNQHQSKSYDQRSIPPKTSSSVAADSIWSDLMQDLSS 69
                  I     +VLVPFTKKV   +QS +  +  +P ++  S  ADS WSD+MQDL +
Sbjct: 45  SKLNSHPIGSGKFMVLVPFTKKVRQCNQSATTSE--VPNQSPVSNFADSAWSDMMQDLRT 102

Query: 68  LAERNQNTEQVH 33
           L+  + N  Q +
Sbjct: 103 LSNMSNNENQTN 114


Top