BLASTX nr result

ID: Cimicifuga21_contig00031868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031868
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269014.1| PREDICTED: transcriptional regulator STERILE...    56   3e-06
ref|XP_002870448.1| predicted protein [Arabidopsis lyrata subsp....    55   8e-06

>ref|XP_002269014.1| PREDICTED: transcriptional regulator STERILE APETALA [Vitis
           vinifera] gi|296085021|emb|CBI28436.3| unnamed protein
           product [Vitis vinifera]
          Length = 460

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 138 DSGCVFIWSGGAIRAWDMQTGVALYNLTEGII-DATVLIANDRHVVAAGSGDTTTIHVWD 314
           + G   +  G  IRAW+++ GV LYNL E  + D   ++A+DR+V A  S   TTIH+WD
Sbjct: 399 NGGYALMCIGSVIRAWEVERGVYLYNLRERTLGDLVAMVADDRYVAACNS--DTTIHLWD 456

Query: 315 FG 320
           FG
Sbjct: 457 FG 458


>ref|XP_002870448.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316284|gb|EFH46707.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
 Frame = +3

Query: 144 GCV-----FIWSGGAIRAWDMQTGVALYNLTEGIIDATVLIANDRHVVAAGSGDT--TTI 302
           GCV      + +GG +R W+++ G  LY++ E + +   ++A+DRHV  A S  T  + I
Sbjct: 382 GCVNRLHALMCAGGIMRVWEVERGEYLYSIRERVGEVDAIVADDRHVAVASSSSTAQSII 441

Query: 303 HVWDFGTI 326
           H+WDFG +
Sbjct: 442 HLWDFGAL 449


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