BLASTX nr result

ID: Cimicifuga21_contig00031853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031853
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26593.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]    87   2e-15
ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13

>emb|CBI26593.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = -3

Query: 458 GIMMNRRAIESDPENDGYYIILSNLYSSTGKWEEAEKVRGIMMNRGVRKSVGWSAV 291
           GI + + AI+SD ENDGYY+++SN+YSS GKWEEAEK RGIM  RGVRK  GWSAV
Sbjct: 404 GIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 459


>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = -3

Query: 458 GIMMNRRAIESDPENDGYYIILSNLYSSTGKWEEAEKVRGIMMNRGVRKSVGWSAV 291
           GI + + AI+SD ENDGYY+++SN+YSS GKWEEAEK RGIM  RGVRK  GWSAV
Sbjct: 689 GIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 744


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/56 (69%), Positives = 45/56 (80%)
 Frame = -3

Query: 458  GIMMNRRAIESDPENDGYYIILSNLYSSTGKWEEAEKVRGIMMNRGVRKSVGWSAV 291
            GI + + AI SD ENDGYY+++SN+YSS GKWEEAEK RGIM  RGVRK  GWSAV
Sbjct: 1056 GIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 1111


>ref|XP_002307076.1| predicted protein [Populus trichocarpa] gi|222856525|gb|EEE94072.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 458 GIMMNRRAIESDPENDGYYIILSNLYSSTGKWEEAEKVRGIMMNRGVRKSVGWSAV 291
           GI + + AIESDPENDGYYI+LSN+Y S GKW+EAE+ R +M  RG+ K  GWSAV
Sbjct: 678 GIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWSAV 733


>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/56 (64%), Positives = 44/56 (78%)
 Frame = -3

Query: 458 GIMMNRRAIESDPENDGYYIILSNLYSSTGKWEEAEKVRGIMMNRGVRKSVGWSAV 291
           G+ + R AIESDP+NDGYYIILS+LYS  G+W+E EKVR +M  RGV K  GWSA+
Sbjct: 699 GVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWSAL 754


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