BLASTX nr result

ID: Cimicifuga21_contig00031836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031836
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|22352...    99   3e-19
ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
emb|CAD98760.1| MYB transcription factor R3 type [Populus tremul...    98   6e-19
ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081...    95   5e-18
emb|CBI30554.3| unnamed protein product [Vitis vinifera]               95   7e-18

>ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|223527970|gb|EEF30054.1|
           myb3r3, putative [Ricinus communis]
          Length = 584

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/87 (57%), Positives = 58/87 (66%)
 Frame = +2

Query: 104 EEMTEMRIEQLCLENRQXXXXXXXXXXXXXNYCIPLKSPEISSPVATSPSNRRITGPIRR 283
           EEM E +IE+ CLEN+Q                  LKSP +SSP   SP++RR TGPIRR
Sbjct: 16  EEMDEAKIEECCLENKQLTAASSSSLSEGSGSAT-LKSPGVSSPATASPTHRRTTGPIRR 74

Query: 284 AKGGWTPQEDDTLRNAVKVFKGKSWKK 364
           AKGGWT +ED+TLRNAV  FKGKSWKK
Sbjct: 75  AKGGWTLEEDETLRNAVAAFKGKSWKK 101


>ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|222854134|gb|EEE91681.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/85 (55%), Positives = 57/85 (67%)
 Frame = +2

Query: 110 MTEMRIEQLCLENRQXXXXXXXXXXXXXNYCIPLKSPEISSPVATSPSNRRITGPIRRAK 289
           M E++IE+ CLEN+Q             +    LKSP + SP   SP+NRR TGPIRRAK
Sbjct: 1   MDELKIEERCLENKQLTPASSSSQSEEGSGSAILKSPGVYSPATVSPTNRRTTGPIRRAK 60

Query: 290 GGWTPQEDDTLRNAVKVFKGKSWKK 364
           GGWTP+ED+TLR AV  +KGKSWKK
Sbjct: 61  GGWTPEEDETLRTAVATYKGKSWKK 85


>emb|CAD98760.1| MYB transcription factor R3 type [Populus tremula x Populus
           tremuloides]
          Length = 530

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/85 (54%), Positives = 57/85 (67%)
 Frame = +2

Query: 110 MTEMRIEQLCLENRQXXXXXXXXXXXXXNYCIPLKSPEISSPVATSPSNRRITGPIRRAK 289
           M E++IE+ CLEN+Q             +    LKSP + SP   SP+NRR TGPIRRAK
Sbjct: 1   MDELKIEERCLENKQLTPASSSSQSEEGSGSAILKSPGVYSPATVSPTNRRTTGPIRRAK 60

Query: 290 GGWTPQEDDTLRNAVKVFKGKSWKK 364
           GGWTP+ED+TLR AV  ++GKSWKK
Sbjct: 61  GGWTPEEDETLRTAVATYRGKSWKK 85


>ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081 [Glycine max]
          Length = 572

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/107 (52%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
 Frame = +2

Query: 47  SCASIPAIFL*GQF*I*L*EEMTEM-RIEQLCLENRQXXXXXXXXXXXXXNYCIPLKSPE 223
           S  SIPA  L         ++M E+ + E+ C EN+Q                I  KSP 
Sbjct: 2   SFTSIPATSL---------QDMAEVVKSEECCQENKQSTAASCSSVSEGSGSAIH-KSPA 51

Query: 224 ISSPVATSPSNRRITGPIRRAKGGWTPQEDDTLRNAVKVFKGKSWKK 364
           I SP +TSPS+RR TGPIRRAKGGWT QED+TLRNAV VFKGKSWKK
Sbjct: 52  ICSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKK 98


>emb|CBI30554.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/79 (59%), Positives = 53/79 (67%)
 Frame = +2

Query: 128 EQLCLENRQXXXXXXXXXXXXXNYCIPLKSPEISSPVATSPSNRRITGPIRRAKGGWTPQ 307
           E+ C+EN+Q                + +KSP I SP  TSPS+RR TGPIRRAKGGWTPQ
Sbjct: 9   EECCVENKQLVTASSSSLSEGSG-SVTVKSPGICSPATTSPSHRRTTGPIRRAKGGWTPQ 67

Query: 308 EDDTLRNAVKVFKGKSWKK 364
           EDDTLR AV  FKGKSWKK
Sbjct: 68  EDDTLRTAVAYFKGKSWKK 86


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