BLASTX nr result

ID: Cimicifuga21_contig00031815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031815
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48575.1| unknown [Medicago truncatula]                           73   3e-11
ref|XP_002316712.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_003546080.1| PREDICTED: protein TIFY 5A-like [Glycine max]      66   3e-09
ref|XP_003631116.1| Protein TIFY 5A [Medicago truncatula] gi|355...    65   4e-09
ref|XP_002277805.1| PREDICTED: protein TIFY 5A [Vitis vinifera] ...    65   6e-09

>gb|AFK48575.1| unknown [Medicago truncatula]
          Length = 134

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 21/133 (15%)
 Frame = +2

Query: 20  MRRNINLNIC--PPTHASSDDS---MEKQQES-------VENQHQPITMFYNGKICVWDV 163
           MRRN NL +C  PP ++S+  +   +E+++E        ++NQHQP+T+FY+GK+CV DV
Sbjct: 1   MRRNCNLELCLFPPYNSSNHQNHPMVEEEEEEDSNESTPMQNQHQPLTIFYDGKMCVTDV 60

Query: 164 TQLQARTILYRAG--EAEEKLRXXXXXXXXXXXXXXXC--QLESP-----TGRSLQQFLQ 316
           T+LQA++IL  A   + +EK+                   QL SP       RSLQ+FLQ
Sbjct: 61  TELQAKSILMLANRIKVQEKVMTPIGSEPSTPTTIVQSPHQLYSPGPGLSMKRSLQRFLQ 120

Query: 317 KRRIRLQSKKCPY 355
           KR+ R+Q +  PY
Sbjct: 121 KRKNRVQ-EASPY 132


>ref|XP_002316712.1| predicted protein [Populus trichocarpa] gi|222859777|gb|EEE97324.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/124 (39%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
 Frame = +2

Query: 20  MRRNINLNICPPTHASSDD-----------SMEKQQESVENQHQP-ITMFYNGKICVWDV 163
           M+RN NL +   T A SD+           S E +Q  +E Q Q  +T+FYNG++ V DV
Sbjct: 1   MKRNCNLELRLHTPADSDNHHHRYQPLVEASNESRQLELEQQEQKQLTIFYNGRVLVCDV 60

Query: 164 TQLQARTILYRAG-EAEEKLRXXXXXXXXXXXXXXXCQLESPTG----RSLQQFLQKRRI 328
            +LQAR IL  A  E E++LR                QL SP G    RSLQ+FL+KR+ 
Sbjct: 61  AELQARAILMLASREMEDRLRSPVGSEPSASSPISPSQLYSPVGLPMKRSLQRFLKKRKH 120

Query: 329 RLQS 340
           R+Q+
Sbjct: 121 RIQA 124


>ref|XP_003546080.1| PREDICTED: protein TIFY 5A-like [Glycine max]
          Length = 133

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 20/133 (15%)
 Frame = +2

Query: 20  MRRNINLNIC--PPTHASSD--DSMEKQQESV---------ENQHQPITMFYNGKICVWD 160
           MRRN NL +   PP+ +     D++E++   +         + Q QP+T+FY+GKICV D
Sbjct: 1   MRRNCNLELALFPPSDSGPPMVDNVEEEASEISPMQNLFHRQEQQQPLTIFYDGKICVAD 60

Query: 161 VTQLQARTILYRAG-EAEEKLR-XXXXXXXXXXXXXXXCQLESP-TG----RSLQQFLQK 319
           VT+LQA++IL  A  + EE++R                 QL SP TG    +SLQ+FLQK
Sbjct: 61  VTELQAKSILMLANRKLEERVRTPTGSEPSSPTVMQSNNQLYSPGTGPSMRKSLQRFLQK 120

Query: 320 RRIRLQSKKCPYK 358
           RR R+Q +  PY+
Sbjct: 121 RRNRVQ-EASPYR 132


>ref|XP_003631116.1| Protein TIFY 5A [Medicago truncatula] gi|355525138|gb|AET05592.1|
           Protein TIFY 5A [Medicago truncatula]
          Length = 218

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
 Frame = +2

Query: 20  MRRNI-NLNIC------PPTHASSDDSMEKQQES-VENQHQPITMFYNGKICVWDVTQLQ 175
           MRRN  NL +C         H +S+  +  ++ES ++NQ QP+T+FY+GK+C+ DVT+ Q
Sbjct: 1   MRRNCSNLELCLFPLYDSGNHNNSNHHIGVEEESPMQNQQQPLTIFYDGKMCLTDVTEFQ 60

Query: 176 ARTILYRAG--EAEEKLRXXXXXXXXXXXXXXXCQLESPTGRSLQQFLQKRRIRLQSKKC 349
           A++IL  A   + +EK++                Q      RSLQ+FLQKR+ R+Q K C
Sbjct: 61  AKSILMLANKIKLQEKVK-----TPRGSEPTTPVQSGLSMKRSLQRFLQKRKNRVQEKIC 115


>ref|XP_002277805.1| PREDICTED: protein TIFY 5A [Vitis vinifera]
           gi|297740738|emb|CBI30920.3| unnamed protein product
           [Vitis vinifera]
          Length = 127

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
 Frame = +2

Query: 104 ENQHQPITMFYNGKICVWDVTQLQARTILYRAG-EAEEKLRXXXXXXXXXXXXXXXCQLE 280
           + Q Q +T+FYNG+ICV DVT+LQAR IL  A  E EEK R                QL 
Sbjct: 40  QQQRQQLTIFYNGRICVCDVTELQARAILQLASREMEEKTR--TPTASDAISSSLHSQLY 97

Query: 281 SPTG----RSLQQFLQKRRIRLQSKKCPY 355
           SPTG    RSLQ+FLQKR+ R+++   PY
Sbjct: 98  SPTGLSMKRSLQRFLQKRKNRMEATS-PY 125


Top