BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031810
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    54   1e-15
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...    45   4e-12
ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...    45   9e-12
ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|2...    53   7e-11
ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|2...    51   1e-08

>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score = 53.9 bits (128), Expect(3) = 1e-15
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 120 LLTKLLTLACTSGSILYTRQIFLSVPNPDA 209
           LLTKLLTLACT+GSILYTRQ+F S+ NPD+
Sbjct: 53  LLTKLLTLACTAGSILYTRQLFFSITNPDS 82



 Score = 38.5 bits (88), Expect(3) = 1e-15
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +2

Query: 212 LFNSLIKASSKSGFPFDAIRFYNHMRYAKLPHS 310
           LFN++IKASSK GF  DAI FY  M    +P S
Sbjct: 84  LFNAIIKASSKFGFSCDAILFYRRMVADSIPQS 116



 Score = 34.7 bits (78), Expect(3) = 1e-15
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 301 PPFNFTFTAIIKACADLSA 357
           P  N+TFTA+IKACAD+SA
Sbjct: 114 PQSNYTFTAVIKACADISA 132


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score = 45.1 bits (105), Expect(3) = 4e-12
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 120 LLTKLLTLACTSGSILYTRQIFLSVPNPDA 209
           LLTKLLTL+C +GSI YTR++F SV +PD+
Sbjct: 44  LLTKLLTLSCAAGSIAYTRRLFRSVSDPDS 73



 Score = 39.3 bits (90), Expect(3) = 4e-12
 Identities = 18/30 (60%), Positives = 22/30 (73%)
 Frame = +2

Query: 212 LFNSLIKASSKSGFPFDAIRFYNHMRYAKL 301
           LFNSLIKASSK GF  DA+ FY  M  +++
Sbjct: 75  LFNSLIKASSKFGFSLDAVLFYRRMLLSRI 104



 Score = 30.8 bits (68), Expect(3) = 4e-12
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 304 PFNFTFTAIIKACADLS 354
           P  +TFT++IKACADLS
Sbjct: 106 PSTYTFTSVIKACADLS 122


>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score = 45.1 bits (105), Expect(3) = 9e-12
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = +3

Query: 120 LLTKLLTLACTSGSILYTRQIFLSVPNPDA 209
           LLTKLLTL+C +GSI YTR++F SV +PD+
Sbjct: 44  LLTKLLTLSCAAGSIAYTRRLFRSVSDPDS 73



 Score = 38.1 bits (87), Expect(3) = 9e-12
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +2

Query: 212 LFNSLIKASSKSGFPFDAIRFYNHMRYAKL 301
           LFNSLIKASS  GF  DA+ FY  M ++++
Sbjct: 75  LFNSLIKASSNFGFSLDAVFFYRRMLHSRI 104



 Score = 30.8 bits (68), Expect(3) = 9e-12
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +1

Query: 304 PFNFTFTAIIKACADLS 354
           P  +TFT++IKACADLS
Sbjct: 106 PSTYTFTSVIKACADLS 122


>ref|XP_002329779.1| predicted protein [Populus trichocarpa] gi|222870841|gb|EEF07972.1|
           predicted protein [Populus trichocarpa]
          Length = 585

 Score = 52.8 bits (125), Expect(3) = 7e-11
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = +3

Query: 108 RPPHLLTKLLTLACTSGSILYTRQIFLSVPNPDA 209
           R   LLTKLL LAC +GSI YTRQIFL+VPNPD+
Sbjct: 42  RSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDS 75



 Score = 33.5 bits (75), Expect(3) = 7e-11
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +1

Query: 304 PFNFTFTAIIKACADLSA 357
           P N+TFT++IK+CADLSA
Sbjct: 109 PSNYTFTSVIKSCADLSA 126



 Score = 24.6 bits (52), Expect(3) = 7e-11
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 212 LFNSLIKASSKS-GFPFDAIRFYNHM 286
           LF SLIK++SKS  F   ++ FY+ M
Sbjct: 77  LFTSLIKSTSKSHNFSIYSLYFYSRM 102


>ref|XP_002305798.1| predicted protein [Populus trichocarpa] gi|222848762|gb|EEE86309.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 51.2 bits (121), Expect(2) = 1e-08
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = +3

Query: 120 LLTKLLTLACTSGSILYTRQIFLSVPNPDA 209
           LLTKLL LAC +GSI YTRQIFL VPNPD+
Sbjct: 46  LLTKLLNLACAAGSISYTRQIFLIVPNPDS 75



 Score = 32.7 bits (73), Expect(2) = 1e-08
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +1

Query: 211 PLQFPYQSLF*VWFPFRRYSVL*SY-----ALC*APPFNFTFTAIIKACADLSA 357
           P  F + SL      F  +SV   Y      L    P N+TFT++IK+CADL A
Sbjct: 73  PDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVA 126