BLASTX nr result

ID: Cimicifuga21_contig00031790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031790
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
 Frame = +2

Query: 71  YLLELGGELHMAIRYLSYTALHARPS-EFHSGFDTMFFEFFKLDFPTRQWERVKTLGDNA 247
           YL+  G EL +  RYL        P  E H  + T+ FE F+LD+   QW R+ TLGD A
Sbjct: 258 YLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKA 317

Query: 248 AFLGNNTSYSSKASDY 295
            F+G N+S S  A+D+
Sbjct: 318 LFIGENSSLSLSATDF 333


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