BLASTX nr result

ID: Cimicifuga21_contig00031779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031779
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806...   138   8e-31
ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi...   137   2e-30
ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medi...   136   3e-30
ref|XP_002528976.1| conserved hypothetical protein [Ricinus comm...   134   1e-29
ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793...   133   2e-29

>ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max]
          Length = 444

 Score =  138 bits (347), Expect = 8e-31
 Identities = 72/117 (61%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
 Frame = +3

Query: 231 SPSTAPPPSR-LQIQELQSPMSVLESILSNLGFQELAVAVPSLSDSAY---YTWNGPSTV 398
           +PST PPP   +      S  ++L  ILS+LGF ELA A PSLSD+A      W GPST+
Sbjct: 39  APSTPPPPPPDIHDHSFFSHTAILPPILSHLGFHELATAAPSLSDAATTGSVAWTGPSTI 98

Query: 399 FAPTDDSIRSCSGSCSVPQLLREHIVPGIFTFDYLKKLAFGTKLETMSTGKCITVTS 569
           FAP+D S+R+C  SCSVP LLREHIVPG+FT DYL+KLAFGTK+ET+S G+CITVTS
Sbjct: 99  FAPSDASLRTCF-SCSVPNLLREHIVPGLFTIDYLRKLAFGTKIETLSPGRCITVTS 154


>ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355524091|gb|AET04545.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 448

 Score =  137 bits (344), Expect = 2e-30
 Identities = 70/113 (61%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
 Frame = +3

Query: 246 PPPSRLQIQELQSPMSVLESILSNLGFQELAVAVPSLSDSAYYT---WNGPSTVFAPTDD 416
           PPP  LQ     S  ++L  ILS+LGF ELA A PSLSD+A  T   W GP T+FAP+D 
Sbjct: 43  PPPHDLQEHSFFSQTALLPPILSHLGFHELATAAPSLSDAATTTSPAWTGPFTIFAPSDA 102

Query: 417 SIRSCSGSCSVPQLLREHIVPGIFTFDYLKKLAFGTKLETMSTGKCITVTSAS 575
           S+R+C  SCSVP LLREHIVPGIFT +YL++LAFGTK+ET+S G+C+TVTS S
Sbjct: 103 SLRTCF-SCSVPNLLREHIVPGIFTIEYLRRLAFGTKIETLSPGRCVTVTSES 154


>ref|XP_003607265.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355508320|gb|AES89462.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 454

 Score =  136 bits (342), Expect = 3e-30
 Identities = 70/113 (61%), Positives = 85/113 (75%), Gaps = 3/113 (2%)
 Frame = +3

Query: 246 PPPSRLQIQELQSPMSVLESILSNLGFQELAVAVPSLSDSAYYT---WNGPSTVFAPTDD 416
           PPP  LQ     S  ++L  ILS+LGF ELA A P+LSD+A  T   W GP T+FAP+D 
Sbjct: 43  PPPHDLQEHSFFSHTALLPPILSHLGFHELATAAPTLSDAATTTSLAWTGPFTIFAPSDA 102

Query: 417 SIRSCSGSCSVPQLLREHIVPGIFTFDYLKKLAFGTKLETMSTGKCITVTSAS 575
           SIR+C  SCSVP LLREHIVPGIFT +YL++LAFGTK+ET+S G+C+TVTS S
Sbjct: 103 SIRTCF-SCSVPNLLREHIVPGIFTIEYLRRLAFGTKIETLSPGRCVTVTSES 154


>ref|XP_002528976.1| conserved hypothetical protein [Ricinus communis]
           gi|223531566|gb|EEF33395.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  134 bits (336), Expect = 1e-29
 Identities = 79/176 (44%), Positives = 101/176 (57%), Gaps = 16/176 (9%)
 Frame = +3

Query: 96  MATRLQLTIVMIALVTSICISRSNADAAMXXXXXXXXXXXXXXILSPSTAPPPSRLQIQE 275
           MAT L L  V++  + ++    S  D A                 +PS  PPP   Q   
Sbjct: 1   MATSLSLPFVLLFAILTLSQPTSTLDTAT----------------TPSPPPPPPPSQTPH 44

Query: 276 LQSP----------------MSVLESILSNLGFQELAVAVPSLSDSAYYTWNGPSTVFAP 407
             SP                 ++L  ILS+LGF EL+ A PSLS +   TW+GPST+FAP
Sbjct: 45  SSSPPPPISHDLHENSFFSHTALLAPILSHLGFTELSTAAPSLSSTE--TWSGPSTLFAP 102

Query: 408 TDDSIRSCSGSCSVPQLLREHIVPGIFTFDYLKKLAFGTKLETMSTGKCITVTSAS 575
           +D SI +C  SCSVP LLREHIVPG++T DYL+KLAFGTK+ET+S G+C+TVTS S
Sbjct: 103 SDSSIHTCL-SCSVPSLLREHIVPGLYTIDYLRKLAFGTKIETLSPGRCLTVTSTS 157


>ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793476 [Glycine max]
          Length = 440

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/111 (61%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
 Frame = +3

Query: 246 PPPSRLQIQELQSPMSVLESILSNLGFQELAVAVPSLSDSAYY---TWNGPSTVFAPTDD 416
           PPP  +      S  ++L  ILS+LGF +LA A PSLSD+A      W GPST+FAP+D 
Sbjct: 45  PPPPAIHEHSFFSHTALLPPILSHLGFHQLATAAPSLSDTATTGSAAWTGPSTIFAPSDA 104

Query: 417 SIRSCSGSCSVPQLLREHIVPGIFTFDYLKKLAFGTKLETMSTGKCITVTS 569
           S+R+C  SCSVP LLREHIVPG+FT DYL+KLAFGTK+ET+S G CITVTS
Sbjct: 105 SLRTCF-SCSVPNLLREHIVPGLFTIDYLRKLAFGTKIETLSPGHCITVTS 154


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