BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031774
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   124   1e-26
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago ...   119   2e-25
ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat...   114   8e-24
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   113   1e-23

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/78 (70%), Positives = 68/78 (87%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           D+DRA+ VFNEA  KGLK N ++ N+L+KGL QQGLILQAL L+NEMSENGCSP +WTYN
Sbjct: 370 DIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYN 429

Query: 183 IIINGLCKLGCLSDANIL 236
           ++INGLCK+GC+SDA+ L
Sbjct: 430 LVINGLCKIGCVSDADNL 447



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +3

Query: 33  EAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNIIINGLCKLG 212
           +  G+GL  + I YN+LI GLC+   +++A + L +M   G  P  +TYN II+G CKLG
Sbjct: 275 DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLG 334

Query: 213 CLSDAN 230
            + +A+
Sbjct: 335 MMQNAD 340



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/71 (35%), Positives = 45/71 (63%)
 Frame = +3

Query: 15  AVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNIIIN 194
           A ++F E  G G+  + + +N LI  LC++G + ++  LLN++ + G SP+++T NI I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 195 GLCKLGCLSDA 227
           G C+   L++A
Sbjct: 260 GFCQRAMLNEA 270


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/78 (69%), Positives = 67/78 (85%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           ++DRA+ +FN A GKGLK   I+YN LIKGLCQ+GLILQAL ++NEMSENGCS  +WTYN
Sbjct: 371 EIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYN 430

Query: 183 IIINGLCKLGCLSDANIL 236
           ++INGLCK+GC+SDAN L
Sbjct: 431 LVINGLCKMGCVSDANNL 448



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/68 (35%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           +V  + ++ N+   KG+ SN   +N  I+GLC++G++  A+++L+ +   G +P + TYN
Sbjct: 231 EVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYN 290

Query: 183 IIINGLCK 206
            +I GLCK
Sbjct: 291 TLICGLCK 298



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/71 (33%), Positives = 43/71 (60%)
 Frame = +3

Query: 15  AVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNIIIN 194
           A+ + +    +GL  + + YN+LI GLC+   +++A   L+++   G  P  +TYN +I+
Sbjct: 270 AMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLID 329

Query: 195 GLCKLGCLSDA 227
           G CK+G L +A
Sbjct: 330 GYCKMGMLQNA 340


>ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
           gi|355510123|gb|AES91265.1| hypothetical protein
           MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           D D+A+ VF +  GKGL+ + IVYN+LIKGLCQQGLIL AL L+NEM+E GC P +WTYN
Sbjct: 450 DPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509

Query: 183 IIINGLCKLGCLSDANIL 236
           +IINGLCK+GCLSDAN L
Sbjct: 510 LIINGLCKMGCLSDANHL 527



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/75 (38%), Positives = 50/75 (66%)
 Frame = +3

Query: 6   VDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNI 185
           +DRAV++    + +GL+ + + YN++I GLC++  +++A   L++M   G  P+ +TYN 
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405

Query: 186 IINGLCKLGCLSDAN 230
           II+G CK G + DAN
Sbjct: 406 IIDGYCKKGMVVDAN 420



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/75 (36%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           D DRA ++F+E     L  +   +N L+  LC++G +L++  L +++ + G  P+++T+N
Sbjct: 275 DNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFN 334

Query: 183 IIINGLCKLGCLSDA 227
           I I GLCK G L  A
Sbjct: 335 IFIQGLCKEGSLDRA 349



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/74 (32%), Positives = 44/74 (59%)
 Frame = +3

Query: 6   VDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNI 185
           +D A+++ N    +G+  + I YN+L+ GLC+     + + +   M+E GC+P++ TYN 
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 186 IINGLCKLGCLSDA 227
           II  LC    +++A
Sbjct: 616 IIESLCNSKKVNEA 629



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/73 (32%), Positives = 41/73 (56%)
 Frame = +3

Query: 9   DRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNII 188
           +  +++F     KG   N I YN++I+ LC    + +A++LL EM   G +P + ++  +
Sbjct: 592 EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651

Query: 189 INGLCKLGCLSDA 227
           I G CK+G L  A
Sbjct: 652 ITGFCKVGDLDGA 664


>ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/78 (64%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           D DRA+ VF +  GKGL+ + ++YN+LIKGL QQGLIL AL L+NEM+ENGC P++WTYN
Sbjct: 345 DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404

Query: 183 IIINGLCKLGCLSDANIL 236
           ++INGLCK+GC+SDA+ L
Sbjct: 405 LVINGLCKMGCVSDASHL 422



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/74 (35%), Positives = 46/74 (62%)
 Frame = +3

Query: 6   VDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNI 185
           +D A ++ N    +G+  + I YN+L+ GLC+ G   + + +   M E GC+P++ TYNI
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510

Query: 186 IINGLCKLGCLSDA 227
           I++ LCK   +++A
Sbjct: 511 IVDSLCKAKKVNEA 524



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/73 (32%), Positives = 46/73 (63%)
 Frame = +3

Query: 9   DRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNII 188
           D A ++F+E   + L  + + +N L+  LC++GL+ ++  LL ++ + G  P+++T+NI 
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257

Query: 189 INGLCKLGCLSDA 227
           + GLC+ G L  A
Sbjct: 258 VQGLCREGALDRA 270



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = +3

Query: 6   VDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNI 185
           V  A  + ++A  KG   +   YN+LI G C+Q  +  A  ++N M   G +P + TYN 
Sbjct: 416 VSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNT 475

Query: 186 IINGLCKLG 212
           ++NGLCK G
Sbjct: 476 LLNGLCKAG 484


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  113 bits (283), Expect = 1e-23
 Identities = 49/78 (62%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   DVDRAVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYN 182
           D+D A+ +F EA GKGLK + ++YN+LIKGL QQGL+L+AL L+N+MS+ G SP +WTYN
Sbjct: 343 DIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYN 402

Query: 183 IIINGLCKLGCLSDANIL 236
           ++INGLCK+GC+SDAN L
Sbjct: 403 LVINGLCKMGCVSDANNL 420



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/72 (36%), Positives = 45/72 (62%)
 Frame = +3

Query: 15  AVKVFNEAAGKGLKSNAIVYNSLIKGLCQQGLILQALNLLNEMSENGCSPSMWTYNIIIN 194
           A ++FN+    G+  +   +N L+  LC++G + +   LLN++ +NG  P+++T+NI I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 195 GLCKLGCLSDAN 230
           GLC+ G L  AN
Sbjct: 260 GLCRKGVLEGAN 271