BLASTX nr result
ID: Cimicifuga21_contig00031698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00031698
(653 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2... 273 3e-71
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera] 271 8e-71
ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi... 270 1e-70
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,... 267 1e-69
dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare] 226 4e-57
>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
predicted protein [Populus trichocarpa]
Length = 500
Score = 273 bits (697), Expect = 3e-71
Identities = 128/214 (59%), Positives = 168/214 (78%)
Frame = +1
Query: 1 MYAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDIT 180
MYAKCGSI++ L++FYK + KD CWN +ISGLALHG+ ++AL +F +M+ PDDIT
Sbjct: 288 MYAKCGSIQQGLQVFYKSQVKDIYCWNALISGLALHGHGYAALNIFNKMRKNHTRPDDIT 347
Query: 181 FIGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFELIQTM 360
FIGLL+ACSH+GLV+EG LF SM+ +FG+SPK EHYGCMV LL RA L A +LI+TM
Sbjct: 348 FIGLLSACSHSGLVQEGSQLFYSMQKEFGISPKIEHYGCMVDLLSRARHLDCALQLIKTM 407
Query: 361 PFETGASARGALLSACLIYKDFQIGEMVAKHLTARGVECLSDGEYVMLANLYALCGRWDE 540
PF+ G + GALLSAC++++D ++GE V K +++RG LSDGE +M +NLYA CG+W+E
Sbjct: 408 PFKPGEAILGALLSACIVHQDLEVGERVVKLVSSRG-NYLSDGELMMFSNLYASCGQWEE 466
Query: 541 ANRWRAMMGDIGIHKTAGCSMIEVNGRLYKFLAG 642
AN+WR MM D GI KTAG S++EVNG+ +KFLAG
Sbjct: 467 ANKWREMMNDTGIVKTAGFSVVEVNGKFHKFLAG 500
Score = 58.5 bits (140), Expect = 1e-06
Identities = 30/117 (25%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 4 YAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDITF 183
Y + +ERA ++F ++ +K+ WN ++ G + L LF +MKT PD +T
Sbjct: 188 YIQGEDMERACDLFREMPAKNIITWNTMVKGFLQNQLYAEVLDLFDEMKTTNCLPDYLTV 247
Query: 184 IGLLTACSHAGLVEEGR--HLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFEL 348
G+L+AC+H+G +++G H++ +++N G++ P ++ + + G ++ ++
Sbjct: 248 TGVLSACAHSGSLKKGTEVHIY-AIDN--GLASSPHVTTALIDMYAKCGSIQQGLQV 301
>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
Length = 1302
Score = 271 bits (693), Expect = 8e-71
Identities = 130/216 (60%), Positives = 163/216 (75%)
Frame = +1
Query: 1 MYAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDIT 180
MYAKCG+I+R+LE+FYK + KD CWN IISGLALHG H+A+KL +M+ G+ PD+IT
Sbjct: 1077 MYAKCGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDKMRDNGIRPDEIT 1136
Query: 181 FIGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFELIQTM 360
FIGLL+ACSH LV+EG LF ME +FG+ PK EHYGCMV LLGRAG L AF+LI+ M
Sbjct: 1137 FIGLLSACSHGSLVQEGCRLFDCMEKEFGLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAM 1196
Query: 361 PFETGASARGALLSACLIYKDFQIGEMVAKHLTARGVECLSDGEYVMLANLYALCGRWDE 540
PFE G S GALL AC+I++D + GE V +T++ +SDGE++M NLYA CG+W E
Sbjct: 1197 PFEPGESILGALLGACVIHQDLETGEKVIBLITSK-AHHVSDGEFMMFVNLYASCGQWKE 1255
Query: 541 ANRWRAMMGDIGIHKTAGCSMIEVNGRLYKFLAGEI 648
ANRWR M + GI KTAG S IEV+G+ Y+FLAG+I
Sbjct: 1256 ANRWRERMNESGIAKTAGGSTIEVDGKFYRFLAGDI 1291
>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 517
Score = 270 bits (691), Expect = 1e-70
Identities = 130/216 (60%), Positives = 163/216 (75%)
Frame = +1
Query: 1 MYAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDIT 180
MYAKCG+I+R+LE+FYK + KD CWN IISGLALHG H+A+KL +M+ G+ PD+IT
Sbjct: 292 MYAKCGTIQRSLEVFYKSQVKDIYCWNAIISGLALHGYGHAAVKLLDKMRDNGVRPDEIT 351
Query: 181 FIGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFELIQTM 360
FIGLL+ACSH LV+EG LF ME +FG+ PK EHYGCMV LLGRAG L AF+LI+ M
Sbjct: 352 FIGLLSACSHRSLVQEGCRLFDCMEKEFGLPPKLEHYGCMVDLLGRAGFLDPAFQLIKAM 411
Query: 361 PFETGASARGALLSACLIYKDFQIGEMVAKHLTARGVECLSDGEYVMLANLYALCGRWDE 540
PFE G S GALL AC+I++D + GE V +T++ +SDGE++M NLYA CG+W E
Sbjct: 412 PFEPGESILGALLGACVIHQDLETGEKVINLITSK-AHHVSDGEFMMFVNLYASCGQWKE 470
Query: 541 ANRWRAMMGDIGIHKTAGCSMIEVNGRLYKFLAGEI 648
ANRWR M + GI KTAG S IEV+G+ Y+FLAG+I
Sbjct: 471 ANRWRERMNESGIAKTAGGSTIEVDGKFYRFLAGDI 506
>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 267 bits (682), Expect = 1e-69
Identities = 129/216 (59%), Positives = 162/216 (75%)
Frame = +1
Query: 1 MYAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDIT 180
MY+KCGSIE+ L +F K + KD CWN +IS LALHG+ ++ALK+F +M+ + PDDIT
Sbjct: 288 MYSKCGSIEQGLHVFCKSQVKDIYCWNALISALALHGHGYAALKVFGKMRKNHIQPDDIT 347
Query: 181 FIGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFELIQTM 360
FIG++ ACSH+GLV+EG LF SM+ FG+SPK EHYGCMV+LLGR+G L A ++I+TM
Sbjct: 348 FIGIINACSHSGLVQEGCQLFVSMQEDFGISPKLEHYGCMVNLLGRSGHLALALQVIETM 407
Query: 361 PFETGASARGALLSACLIYKDFQIGEMVAKHLTARGVECLSDGEYVMLANLYALCGRWDE 540
PFE G S GALLSAC+IY+D + GE V + L LSDGE +M +NLYA CG W+E
Sbjct: 408 PFEPGESILGALLSACIIYQDLETGERVIE-LVCSKAHYLSDGELMMFSNLYASCGNWEE 466
Query: 541 ANRWRAMMGDIGIHKTAGCSMIEVNGRLYKFLAGEI 648
ANRWR MM GI KTAG S+IEV+GR KFLAGE+
Sbjct: 467 ANRWREMMNSTGIVKTAGYSVIEVSGRFQKFLAGEV 502
>dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 226 bits (575), Expect = 4e-57
Identities = 105/216 (48%), Positives = 156/216 (72%)
Frame = +1
Query: 1 MYAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDIT 180
MY KCGS+E A+ +F+ + +KD WN +I+G A+HG++ AL++F Q++ +GL P DIT
Sbjct: 296 MYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDIT 355
Query: 181 FIGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTAFELIQTM 360
FIGLL ACSH+GLVEEGR F SME+++G+ PK EHYGCMV LLGRAGL++ AF L+Q++
Sbjct: 356 FIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSL 415
Query: 361 PFETGASARGALLSACLIYKDFQIGEMVAKHLTARGVECLSDGEYVMLANLYALCGRWDE 540
A +LL+AC ++K+ +G+ +A L A G+ + G Y++L+N+YA G+W+E
Sbjct: 416 TITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGL--ANSGMYILLSNIYAAVGKWEE 473
Query: 541 ANRWRAMMGDIGIHKTAGCSMIEVNGRLYKFLAGEI 648
R R+MM GI K GCS IE++ ++Y+F+AG++
Sbjct: 474 VARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDM 509
Score = 68.2 bits (165), Expect = 1e-09
Identities = 36/112 (32%), Positives = 58/112 (51%)
Frame = +1
Query: 4 YAKCGSIERALEIFYKLKSKDNCCWNVIISGLALHGNAHSALKLFQQMKTKGLSPDDITF 183
YA G+++ A +F L KD CWN +I G HG + AL+LF++M PD++T
Sbjct: 195 YANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTV 254
Query: 184 IGLLTACSHAGLVEEGRHLFGSMENKFGVSPKPEHYGCMVHLLGRAGLLKTA 339
+ +L+A + G VE G+ L ++N V +V + + G L+ A
Sbjct: 255 VLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDA 306