BLASTX nr result

ID: Cimicifuga21_contig00031688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031688
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38861.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002279521.1| PREDICTED: LOB domain-containing protein 18 ...    74   9e-12
ref|XP_002511730.1| LOB domain-containing protein, putative [Ric...    74   1e-11
ref|XP_002320063.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004145058.1| PREDICTED: LOB domain-containing protein 18-...    66   3e-09

>emb|CBI38861.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/58 (63%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +3

Query: 90  SIADLPSASSMPPSFDLATLFDPLLQP-SWILQQ-RQMDFRQYGGGRNLTDNPLSGGG 257
           SI+DLPSASSMPP++DL++LFDP++QP SW +QQ RQ+D RQ+GG R  TD P + GG
Sbjct: 169 SISDLPSASSMPPTYDLSSLFDPMVQPSSWPMQQHRQIDPRQFGGSRGPTDLPSTAGG 226


>ref|XP_002279521.1| PREDICTED: LOB domain-containing protein 18 [Vitis vinifera]
          Length = 251

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/58 (63%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +3

Query: 90  SIADLPSASSMPPSFDLATLFDPLLQP-SWILQQ-RQMDFRQYGGGRNLTDNPLSGGG 257
           SI+DLPSASSMPP++DL++LFDP++QP SW +QQ RQ+D RQ+GG R  TD P + GG
Sbjct: 156 SISDLPSASSMPPTYDLSSLFDPMVQPSSWPMQQHRQIDPRQFGGSRGPTDLPSTAGG 213


>ref|XP_002511730.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223548910|gb|EEF50399.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 247

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
 Frame = +3

Query: 3   YLQAHXXXXXXXXXXXXXXXXXXXXXXXXSIADLPSASSMPPSFDLATLFDPLLQ--PSW 176
           YLQAH                        SIADLPSASS+P ++DL++LFDP+ Q  PSW
Sbjct: 123 YLQAHLATLELPSPPPPPPPQSLVPPPPLSIADLPSASSVPATYDLSSLFDPMTQPSPSW 182

Query: 177 ILQQRQMDFRQYGGGRNLTDNPLS----GGGD 260
            +QQRQMD RQ+GGG +L  +  +    GGGD
Sbjct: 183 AMQQRQMDPRQFGGGSSLGSSSATIGGCGGGD 214


>ref|XP_002320063.1| predicted protein [Populus trichocarpa] gi|222860836|gb|EEE98378.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/59 (57%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
 Frame = +3

Query: 90  SIADLPSASSMPPSFDLATLFDPLLQPSW--ILQQRQMDFRQYGGGRNLTDNPLSGGGD 260
           SIADLPSASS+P ++DL+ LFDP++QPSW  +  QRQMD RQ+GG    +    +GGGD
Sbjct: 158 SIADLPSASSIPAAYDLSCLFDPMMQPSWSNMQPQRQMDIRQFGGSGGSSG---TGGGD 213


>ref|XP_004145058.1| PREDICTED: LOB domain-containing protein 18-like [Cucumis sativus]
           gi|449472972|ref|XP_004153747.1| PREDICTED: LOB
           domain-containing protein 18-like [Cucumis sativus]
           gi|449527513|ref|XP_004170755.1| PREDICTED: LOB
           domain-containing protein 18-like [Cucumis sativus]
          Length = 240

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 26/44 (59%), Positives = 39/44 (88%)
 Frame = +3

Query: 90  SIADLPSASSMPPSFDLATLFDPLLQPSWILQQRQMDFRQYGGG 221
           SI+DLPSASS+P ++DL++LFDP+ QP+W +QQ+++D RQ+ GG
Sbjct: 157 SISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGG 200


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