BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031677
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]    115   4e-24

>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/106 (54%), Positives = 79/106 (74%)
 Frame = +2

Query: 8   NIKMNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALKLF 187
           N+++   LG+AL+DMYSKCG +E AL VF ++++K    W+AMI GLAI+G+G DAL LF
Sbjct: 298 NVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLF 357

Query: 188 SQMQAQNVEFDDVTVSAILNACSHSGLVDDGLHFFSSITDVYSMTP 325
           SQM+ Q V+ ++VT   ILNACSHS LVD+G  FF S+T +Y + P
Sbjct: 358 SQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKP 403


>ref|XP_002328495.1| predicted protein [Populus trichocarpa] gi|222838210|gb|EEE76575.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/108 (57%), Positives = 79/108 (73%)
 Frame = +2

Query: 2   KLNIKMNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALK 181
           ++ IK++A LGSAL+DMY KCG IE A  VF E+  K   +W  MITGLA HG GS AL+
Sbjct: 326 RMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALE 385

Query: 182 LFSQMQAQNVEFDDVTVSAILNACSHSGLVDDGLHFFSSITDVYSMTP 325
           LFS+MQ ++V  DDVT  ++L+ACSHSGLVD G+  FSS+TD Y + P
Sbjct: 386 LFSEMQ-EDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTD-YGIEP 431


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/106 (47%), Positives = 79/106 (74%)
 Frame = +2

Query: 11  IKMNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALKLFS 190
           I M+  +G+AL++MYSKCGC++ +L +F E+EDK T  W ++I GLA++G+ S+AL+LFS
Sbjct: 461 ITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFS 520

Query: 191 QMQAQNVEFDDVTVSAILNACSHSGLVDDGLHFFSSITDVYSMTPK 328
           +M+    + DD+T   +L+ACSH GLV++G  FF+S+  V+ + PK
Sbjct: 521 EMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 566


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  115 bits (289), Expect = 3e-24
 Identities = 50/106 (47%), Positives = 79/106 (74%)
 Frame = +2

Query: 11  IKMNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALKLFS 190
           I M+  +G+AL++MYSKCGC++ +L +F E+EDK T  W ++I GLA++G+ S+AL+LFS
Sbjct: 507 ITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFS 566

Query: 191 QMQAQNVEFDDVTVSAILNACSHSGLVDDGLHFFSSITDVYSMTPK 328
           +M+    + DD+T   +L+ACSH GLV++G  FF+S+  V+ + PK
Sbjct: 567 EMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPK 612


>dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/107 (50%), Positives = 74/107 (69%)
 Frame = +2

Query: 8   NIKMNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALKLF 187
           NI+M   LG+ALVDMY+KCG ++L + VF  ++DK    W  MI GLA+HGRGSD+L LF
Sbjct: 255 NIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLF 314

Query: 188 SQMQAQNVEFDDVTVSAILNACSHSGLVDDGLHFFSSITDVYSMTPK 328
           SQM++  V+ DD+     L AC+H+GLVD G   F+S+ + Y + PK
Sbjct: 315 SQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPK 361



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/88 (32%), Positives = 51/88 (57%)
 Frame = +2

Query: 17  MNATLGSALVDMYSKCGCIELALHVFAEVEDKTTELWNAMITGLAIHGRGSDALKLFSQM 196
           ++A+  + L+  +++ G +  A  +F E+ ++    W+AM+ G    G G +AL +FSQM
Sbjct: 157 VDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQM 216

Query: 197 QAQNVEFDDVTVSAILNACSHSGLVDDG 280
           QAQ V  DD  +  +L AC+  G ++ G
Sbjct: 217 QAQGVRPDDTVLVGVLAACAQLGALEQG 244