BLASTX nr result

ID: Cimicifuga21_contig00031638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031638
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|AFZ78629.1| korrigan [Populus tomentosa]                           185   5e-45
gb|AFZ78628.1| korrigan [Populus tomentosa]                           182   4e-44
ref|XP_002315101.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vini...   176   2e-42

>ref|XP_002312211.1| predicted protein [Populus trichocarpa] gi|222852031|gb|EEE89578.1|
           predicted protein [Populus trichocarpa]
           gi|347466549|gb|AEO97187.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466603|gb|AEO97214.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 620

 Score =  186 bits (472), Expect = 2e-45
 Identities = 88/138 (63%), Positives = 111/138 (80%)
 Frame = +3

Query: 12  MSSDVLRRFATSQVDYILGANPMGMSYLVGYGNKFPKHVHHRGASTPAPSATRKTTYTCN 191
           +S D+LR FATSQ++YILG NPM MSY+VGYG KFP+HVHHRGASTP+     KT Y+C 
Sbjct: 475 ISLDLLRSFATSQINYILGDNPMKMSYVVGYGTKFPRHVHHRGASTPSD----KTRYSCT 530

Query: 192 NGWVWFNTTKPNPNNITGAMVGGPYKSDVYKDDRRDHGSTEPTLTGNAGLVAALVSLTTS 371
            GW W +++KPNP+NITGAMVGGP + D ++D R ++  TEPTL GNAGLVAAL SLT+S
Sbjct: 531 GGWKWRDSSKPNPHNITGAMVGGPDRFDQFRDVRTNYNFTEPTLAGNAGLVAALASLTSS 590

Query: 372 GGLGNDRNTISSAVPSLF 425
           GG+G D+N+I +AVP L+
Sbjct: 591 GGIGIDKNSIFTAVPPLY 608


>gb|AFZ78629.1| korrigan [Populus tomentosa]
          Length = 621

 Score =  185 bits (469), Expect = 5e-45
 Identities = 88/138 (63%), Positives = 111/138 (80%)
 Frame = +3

Query: 12  MSSDVLRRFATSQVDYILGANPMGMSYLVGYGNKFPKHVHHRGASTPAPSATRKTTYTCN 191
           +S DVLR FATSQ++YILG NPM MSY+VGYG KFP+HVHHRGASTP+ +      Y+C 
Sbjct: 476 ISLDVLRNFATSQINYILGDNPMKMSYVVGYGTKFPRHVHHRGASTPSDNVR----YSCT 531

Query: 192 NGWVWFNTTKPNPNNITGAMVGGPYKSDVYKDDRRDHGSTEPTLTGNAGLVAALVSLTTS 371
            GW W +++KPNP+NITGAMVGGP + D ++D R ++  TEPTL GNAGLVAALVSLT+S
Sbjct: 532 GGWKWRDSSKPNPHNITGAMVGGPDRFDQFRDVRTNYNFTEPTLAGNAGLVAALVSLTSS 591

Query: 372 GGLGNDRNTISSAVPSLF 425
           GG+G ++N+I SAVP L+
Sbjct: 592 GGIGINKNSIFSAVPPLY 609


>gb|AFZ78628.1| korrigan [Populus tomentosa]
          Length = 691

 Score =  182 bits (462), Expect = 4e-44
 Identities = 87/135 (64%), Positives = 106/135 (78%)
 Frame = +3

Query: 21  DVLRRFATSQVDYILGANPMGMSYLVGYGNKFPKHVHHRGASTPAPSATRKTTYTCNNGW 200
           DVLR FATSQ++YILG NPM MSY+VGYG KFP+H+HHRGAS P      K  Y+C  GW
Sbjct: 479 DVLRSFATSQINYILGDNPMKMSYVVGYGTKFPRHIHHRGASIP----NDKRRYSCTGGW 534

Query: 201 VWFNTTKPNPNNITGAMVGGPYKSDVYKDDRRDHGSTEPTLTGNAGLVAALVSLTTSGGL 380
            W +  KPNPNNITGAMVGGP + D ++D R+++  TEPTL GNAGLVAALVSLT+SGG+
Sbjct: 535 KWRDRPKPNPNNITGAMVGGPDRFDRFRDVRKNYNFTEPTLAGNAGLVAALVSLTSSGGI 594

Query: 381 GNDRNTISSAVPSLF 425
           G ++N+I SAVP L+
Sbjct: 595 GINKNSIFSAVPPLY 609


>ref|XP_002315101.1| predicted protein [Populus trichocarpa] gi|222864141|gb|EEF01272.1|
           predicted protein [Populus trichocarpa]
           gi|347466547|gb|AEO97186.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466601|gb|AEO97213.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 621

 Score =  181 bits (460), Expect = 6e-44
 Identities = 86/135 (63%), Positives = 106/135 (78%)
 Frame = +3

Query: 21  DVLRRFATSQVDYILGANPMGMSYLVGYGNKFPKHVHHRGASTPAPSATRKTTYTCNNGW 200
           DVLR FATSQ++YILG NPM MSY+VGYG KFP+H+HHRGAS P      K +Y+C  GW
Sbjct: 479 DVLRSFATSQINYILGDNPMKMSYVVGYGTKFPRHIHHRGASIP----NDKRSYSCTGGW 534

Query: 201 VWFNTTKPNPNNITGAMVGGPYKSDVYKDDRRDHGSTEPTLTGNAGLVAALVSLTTSGGL 380
            W ++ KPNPNNITGAMVGGP + D ++D R+++  TEPTL GNAGLVAAL SLT+SGG+
Sbjct: 535 KWRDSPKPNPNNITGAMVGGPDRFDRFRDVRKNYNFTEPTLAGNAGLVAALSSLTSSGGI 594

Query: 381 GNDRNTISSAVPSLF 425
           G D+N + SAVP L+
Sbjct: 595 GIDKNRMFSAVPPLY 609


>ref|XP_002266444.2| PREDICTED: endoglucanase 12-like [Vitis vinifera]
          Length = 536

 Score =  176 bits (447), Expect = 2e-42
 Identities = 85/136 (62%), Positives = 103/136 (75%)
 Frame = +3

Query: 18  SDVLRRFATSQVDYILGANPMGMSYLVGYGNKFPKHVHHRGASTPAPSATRKTTYTCNNG 197
           ++ LR FATSQ++YILG NPM MSYLVGYG KFPKHVHHRGAS P  +      Y+C  G
Sbjct: 393 AETLRSFATSQINYILGKNPMKMSYLVGYGTKFPKHVHHRGASIPNDNKK----YSCTGG 448

Query: 198 WVWFNTTKPNPNNITGAMVGGPYKSDVYKDDRRDHGSTEPTLTGNAGLVAALVSLTTSGG 377
           W W ++  PNP+NITGAMVGGP ++D ++D R ++  TEPTL GNAGLVAALVSLT SGG
Sbjct: 449 WKWRDSRNPNPHNITGAMVGGPIRTDNFQDIRTNYNYTEPTLAGNAGLVAALVSLTGSGG 508

Query: 378 LGNDRNTISSAVPSLF 425
           +  D+NTI SAVP  +
Sbjct: 509 MSIDKNTIFSAVPPFY 524


Top