BLASTX nr result

ID: Cimicifuga21_contig00031623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031623
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]...    87   2e-15
ref|XP_002313538.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002331453.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
gb|AFK33607.1| unknown [Medicago truncatula]                           80   2e-13
ref|XP_002523714.1| Shugoshin-1, putative [Ricinus communis] gi|...    79   4e-13

>ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]
           gi|296085974|emb|CBI31415.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 53/94 (56%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +2

Query: 2   RQSARHKPEHVEPTEDLFEIEDTRFPMSTLLDENTQD-VPTSSTAEEVKREADWNCG-DT 175
           RQS R      EPTEDLFEI+D +FP S L D+   D  PTS  +   K   D      T
Sbjct: 223 RQSTRFISVKSEPTEDLFEIDDAKFPASQLHDDPMHDNCPTSLGSSGKKANGDGALEVAT 282

Query: 176 PAFR-TSIGRPMRRAAVKVQSYKEIPVNVKMRRA 274
           P FR +SIGRP+RRAA KVQSYKEIP+NVKMRR+
Sbjct: 283 PEFRRSSIGRPLRRAAEKVQSYKEIPINVKMRRS 316


>ref|XP_002313538.1| predicted protein [Populus trichocarpa] gi|222849946|gb|EEE87493.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
 Frame = +2

Query: 2   RQSARHKPEHVEPTEDLFEIEDTRFPMSTLLDENTQD---VPTSSTAEEVKREADWNCGD 172
           RQSA  + +  EP E+LFEIED RFP+S   D++ ++     +S T EE+ + ++     
Sbjct: 207 RQSAASRSQEREPAENLFEIEDVRFPVSNSSDKSMKENGQTSSSITKEEICKPSN---EA 263

Query: 173 TPAFRTSIGRPMRRAAVKVQSYKEIPVNVKMRRA 274
             + R+SIGRP RRAA KVQSYKE+P+NVKMRRA
Sbjct: 264 QVSHRSSIGRPSRRAAEKVQSYKEVPLNVKMRRA 297


>ref|XP_002331453.1| predicted protein [Populus trichocarpa] gi|222873531|gb|EEF10662.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/95 (51%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
 Frame = +2

Query: 2   RQSARHKPEHVEPTEDLFEIEDTRFPMSTLLDENTQDVPTSSTAEEVKREADWNCGD--- 172
           RQSAR K +  EP E LFEIE  +FP+S         + +S T EE        CG    
Sbjct: 25  RQSARFKSQEREPAEKLFEIEVAKFPVSRDKSRKENGLTSSITKEET-------CGAGNE 77

Query: 173 -TPAFRTSIGRPMRRAAVKVQSYKEIPVNVKMRRA 274
              + R+SIGRP+RRAA KVQSYKE+PVNVKMRRA
Sbjct: 78  AQVSLRSSIGRPLRRAAEKVQSYKEVPVNVKMRRA 112


>gb|AFK33607.1| unknown [Medicago truncatula]
          Length = 397

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/90 (45%), Positives = 57/90 (63%)
 Frame = +2

Query: 2   RQSARHKPEHVEPTEDLFEIEDTRFPMSTLLDENTQDVPTSSTAEEVKREADWNCGDTPA 181
           RQSA  +PE  EP ED F+ ED +F +S L D+ ++ +PT+S+  E              
Sbjct: 308 RQSALFRPEKPEPAEDFFDTEDPKFEVSNLYDDMSESLPTASS--ETSENNACTLDPQVT 365

Query: 182 FRTSIGRPMRRAAVKVQSYKEIPVNVKMRR 271
            R+SIGRP RR+AVKV  Y+E+P+N+KMRR
Sbjct: 366 RRSSIGRPSRRSAVKVVLYREVPINLKMRR 395


>ref|XP_002523714.1| Shugoshin-1, putative [Ricinus communis]
           gi|223537018|gb|EEF38654.1| Shugoshin-1, putative
           [Ricinus communis]
          Length = 302

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
 Frame = +2

Query: 2   RQSARHKPEHVEPTEDLFEIEDTRFPMSTLLD----ENTQDVPTSSTAEEVKREADWNCG 169
           RQSAR K +  EP+E+LFEIED    ++  LD    E+ Q +P SS  +E +        
Sbjct: 208 RQSARFKSQEREPSENLFEIEDVTLSITQQLDNPVQEDAQTLPESSVIKEEETCDSRTEA 267

Query: 170 DTPAFRTSIGRPMRRAAVKVQSYKEIPVNVKMRR 271
             P  R+S+GRP+RRAA KVQSYKE P+NVK+RR
Sbjct: 268 QVPQ-RSSLGRPVRRAAEKVQSYKEAPINVKLRR 300


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