BLASTX nr result

ID: Cimicifuga21_contig00031612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031612
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001774432.1| predicted protein [Physcomitrella patens sub...    69   5e-10
ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trich...    65   6e-09
ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trich...    65   8e-09
ref|XP_001773946.1| predicted protein [Physcomitrella patens sub...    64   1e-08
ref|XP_001778190.1| predicted protein [Physcomitrella patens sub...    64   1e-08

>ref|XP_001774432.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674284|gb|EDQ60795.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 394

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SLS+ GCWKL +LP E GN++S+ S  + GC  L SLP E+G  +SLT L++
Sbjct: 165 LSNLTSLPSLSLSGCWKLTSLPNELGNLTSLTSLNLSGCSNLTSLPNELGNLTSLTSLKL 224

Query: 176 YDCRSLADL 202
             C +L  L
Sbjct: 225 RRCSNLTSL 233



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NL +L SL++ GCW+L++LP E GN++S+ S  I  C EL SLP E+G  +SL  L +
Sbjct: 285 LGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLHISKCWELTSLPNELGNLTSLILLNL 344

Query: 176 YDCRSLADLSEGL 214
            +C +L  L   L
Sbjct: 345 SECSNLTSLPNEL 357



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL I GC KL +LP + GN++S+ S  + G   L SLP E+G  +SLT L +
Sbjct: 69  LGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNLSGNSSLTSLPNEMGNLTSLTSLNL 128

Query: 176 YDCRSLADLSEGL 214
             C +L  L   L
Sbjct: 129 KRCSNLTSLPNEL 141



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL++  C  L +LP E GN++S+ S  + GC  L SLP E+G  +SLT L I
Sbjct: 261 LVNLTSLTSLNLSRCSSLTSLPNELGNLASLTSLNLSGCWRLRSLPNELGNLTSLTSLHI 320

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 321 SKCWELTSLPNEL 333



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL++ G W++  LP E GN++S+ S  I GC +L SLP ++G  +SLT L +
Sbjct: 45  LVNLTSLTSLNLSGFWEVTLLPNELGNLTSLTSLEISGCSKLTSLPNKLGNLTSLTSLNL 104

Query: 176 YDCRSLADL 202
               SL  L
Sbjct: 105 SGNSSLTSL 113


>ref|XP_002302960.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844686|gb|EEE82233.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1091

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
 Frame = +2

Query: 2    LQNLTALKSLSIKGCWKLQTLPTES-GNISSIESFTIKGCPELNSLPEVGRSSLTRLEIY 178
            L NL++LK+LSI  C +L++LP E   N++S+E  +I GC  LNSLP    SSL RL I 
Sbjct: 902  LDNLSSLKTLSITACDELESLPEEGLRNLNSLEVLSINGCGRLNSLPMNCLSSLRRLSIK 961

Query: 179  DCRSLADLSEGLR 217
             C   A LSEG+R
Sbjct: 962  YCDQFASLSEGVR 974


>ref|XP_002302910.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844636|gb|EEE82183.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1131

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
 Frame = +2

Query: 2    LQNLTALKSLSIKGCWKLQTLPTES-GNISSIESFTIKGCPELNSLPE---VGRSSLTRL 169
            L NLTALKSL I+ C+KLQ+LP E   N++S+E   I  C  LNSLP     G SSL +L
Sbjct: 944  LDNLTALKSLKIQCCYKLQSLPEEGLRNLNSLEVLDIHDCGRLNSLPMKGLCGLSSLRKL 1003

Query: 170  EIYDCRSLADLSEGLR 217
             I +C     LSEG+R
Sbjct: 1004 FIRNCDKFTSLSEGVR 1019


>ref|XP_001773946.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674790|gb|EDQ61294.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 528

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL++ GCW L +LP E GN++++ S  I GC +L SLP E+G  ++LT L I
Sbjct: 280 LGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNISGCQKLTSLPNELGNLTTLTSLNI 339

Query: 176 YDCRSLADLSEGL 214
             C+ L  L   L
Sbjct: 340 SRCQKLTSLPNEL 352



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLPE--VGRSSLTRLEI 175
           L NLT+L SL++  CWKL +LP E GN+ S+ S  + GC EL SLP      +SL  L +
Sbjct: 184 LGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNLSGCWELTSLPNDLNNLTSLVSLNL 243

Query: 176 YDCRSLADLSEGLRGCQT 229
           ++C SL  L   L    T
Sbjct: 244 FECPSLIILPNELGNLTT 261



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL++ GCW+L +LP E GN++S+ S  +  C  L SLP E+G  +SLT L++
Sbjct: 40  LGNLTSLTSLNLSGCWELTSLPNELGNLTSLTSLNLCDCSRLTSLPNELGNLTSLTSLDM 99

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 100 SKCPYLTSLPNEL 112



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL+I GC KL +LP E GN++S+ S  ++ C  L SLP E+G  +SLT L I
Sbjct: 424 LGNLTSLTSLNISGCQKLTSLPNELGNLTSLTSINLRHCSRLKSLPNELGNLTSLTSLNI 483

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 484 SGCWELTSLPNEL 496



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT L SL+I  C KL +LP E GN++S+ S  + GC +L SLP E+G  ++LT L I
Sbjct: 256 LGNLTTLTSLNISECLKLTSLPNELGNLTSLTSLNLSGCWDLTSLPNELGNMTTLTSLNI 315

Query: 176 YDCRSLADLSEGLRGCQT 229
             C+ L  L   L    T
Sbjct: 316 SGCQKLTSLPNELGNLTT 333



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NL +L SL++ GCW+L +L  E GN++S+ S  I GC +L SLP E+G  +SLT + +
Sbjct: 400 LGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNISGCQKLTSLPNELGNLTSLTSINL 459

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 460 RHCSRLKSLPNEL 472



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NL +L SL++ GCWKL +LP E GN++S+    +  C  L SLP E+G  ++LT L I
Sbjct: 112 LGNLASLTSLNLSGCWKLTSLPNELGNLTSLAFLNLCDCSRLTSLPNELGNLTTLTSLNI 171

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 172 SGCLKLTSLPNEL 184



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSL-PEVGR-SSLTRLEI 175
           L NLT L S +I GC KL +LP E GN+ S+ S  + GC EL SL  E+G  +SLT L I
Sbjct: 376 LSNLTTLTSSNISGCLKLTSLPNELGNLISLISLNLSGCWELTSLRNELGNLTSLTSLNI 435

Query: 176 YDCRSLADLSEGL 214
             C+ L  L   L
Sbjct: 436 SGCQKLTSLPNEL 448



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NL++L +L++  C  L +LP E GN++S+ S  + GC EL SLP E+G  +SLT L +
Sbjct: 16  LGNLSSLTTLNMSKCRSLASLPNELGNLTSLTSLNLSGCWELTSLPNELGNLTSLTSLNL 75

Query: 176 YDCRSLADLSEGL 214
            DC  L  L   L
Sbjct: 76  CDCSRLTSLPNEL 88



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT L SL+I GC KL +LP E GN++S+ S  +  C +L SLP E+G   SLT L +
Sbjct: 160 LGNLTTLTSLNISGCLKLTSLPNELGNLTSLTSLNLSRCWKLISLPNELGNLISLTSLNL 219

Query: 176 YDCRSLADLSEGL 214
             C  L  L   L
Sbjct: 220 SGCWELTSLPNDL 232



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLPEVGRSSLTRL 169
           L NLT+L SL+I GCW+L +LP E GN++S+ S  +  C EL SLP    S+LT L
Sbjct: 472 LGNLTSLTSLNISGCWELTSLPNELGNLTSLISLNLSRCWELTSLPN-KLSNLTSL 526


>ref|XP_001778190.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670403|gb|EDQ56972.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 351

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L N T+L SL++ GCWKL +LP E GN++S+ S  + GC  L SLP E+G  +SLT L +
Sbjct: 193 LGNFTSLTSLNLSGCWKLISLPNELGNLTSLTSLNLSGCLSLTSLPNELGNLTSLTSLNL 252

Query: 176 YDCRSLADLSEGL 214
             C SL  L   L
Sbjct: 253 SGCLSLITLPNEL 265



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L NLT+L SL++ GC  L TLP E GN +S+ S  + GC +L SLP E+G  +SLT L +
Sbjct: 169 LGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELGNLTSLTSLNL 228

Query: 176 YDCRSLADLSEGL 214
             C SL  L   L
Sbjct: 229 SGCLSLTSLPNEL 241



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLP-EVGR-SSLTRLEI 175
           L N T+L SL++ GCWKL +LP E GN++S+ S  +  C +L SLP E+G  +SLT L +
Sbjct: 21  LGNFTSLTSLNLSGCWKLISLPNELGNLTSLSSLNLVECWKLTSLPNELGNLTSLTSLNL 80

Query: 176 YDC 184
             C
Sbjct: 81  SGC 83



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLPEV--GRSSLTRLEI 175
           L NLT+L SL++  CWKL +LP E GN++S+ S  + GC +L SLP      +S T L +
Sbjct: 289 LDNLTSLSSLNLVECWKLTSLPNELGNLTSLTSLNLSGCWKLTSLPNELDNLTSFTSLNL 348

Query: 176 YDC 184
             C
Sbjct: 349 SGC 351



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   LQNLTALKSLSIKGCWKLQTLPTESGNISSIESFTIKGCPELNSLPEV--GRSSLTRLEI 175
           L NLT+L SL++ GC  L TLP E GN +S+ S  + GC +L SLP      +SL+ L +
Sbjct: 241 LGNLTSLTSLNLSGCLSLITLPNELGNFTSLTSLNLSGCWKLISLPNELDNLTSLSSLNL 300

Query: 176 YDCRSLADLSEGL 214
            +C  L  L   L
Sbjct: 301 VECWKLTSLPNEL 313


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