BLASTX nr result

ID: Cimicifuga21_contig00031597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031597
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...    99   3e-19
ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...    88   6e-16
emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]    88   6e-16
ref|XP_003598309.1| Actin related protein [Medicago truncatula] ...    85   5e-15
gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana]           84   2e-14

>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
           gi|222847846|gb|EEE85393.1| actin related protein
           [Populus trichocarpa]
          Length = 473

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 42/67 (62%), Positives = 57/67 (85%)
 Frame = +1

Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQQPSGWDTIFFAEKH 411
           R+P+D+  QI++ +GPK+AAR+S+VCKSWR +VSDNRLWI+FLQN   + WD++FF E H
Sbjct: 45  RLPIDVVLQIVRLVGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT-WDSVFFVETH 103

Query: 412 LRSGYPL 432
           LRSGYP+
Sbjct: 104 LRSGYPI 110


>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
           gi|296090034|emb|CBI39853.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +1

Query: 235 IPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQ--QPSGWDTIFFAEK 408
           IP D+F  IL+FL P+E A++S+VCK W+ +VSDN+LW++ LQ +  QP  WD++ FAE 
Sbjct: 39  IPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAET 98

Query: 409 HLRSGYPL 432
           HL+ GYPL
Sbjct: 99  HLQMGYPL 106


>emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]
          Length = 451

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +1

Query: 235 IPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQ--QPSGWDTIFFAEK 408
           IP D+F  IL+FL P+E A++S+VCK W+ +VSDN+LW++ LQ +  QP  WD++ FAE 
Sbjct: 39  IPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAET 98

Query: 409 HLRSGYPL 432
           HL+ GYPL
Sbjct: 99  HLQMGYPL 106


>ref|XP_003598309.1| Actin related protein [Medicago truncatula]
           gi|355487357|gb|AES68560.1| Actin related protein
           [Medicago truncatula]
          Length = 471

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = +1

Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQ-NQQPSGWDTIFFAEK 408
           ++P D+  QIL+ LGPKE A++S++CKS +  VSDNRLW+ FLQ +Q    WD++FFAE 
Sbjct: 41  QLPSDILIQILRLLGPKEVAKLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVFFAET 100

Query: 409 HLRSGYPL 432
           +L SGYPL
Sbjct: 101 NLISGYPL 108


>gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana]
          Length = 387

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = +1

Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQ-NQQPSGWDTIFFAEK 408
           ++P+D+  QIL  + PK+A ++ + CK+W+ V S NRLWIF+LQ +Q+P  WD+IFFAE 
Sbjct: 45  QLPMDILVQILMMMEPKDAVKLGLTCKAWKCVASGNRLWIFYLQCSQEP--WDSIFFAET 102

Query: 409 HLRSGYPL 432
            LRSGYPL
Sbjct: 103 SLRSGYPL 110


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