BLASTX nr result
ID: Cimicifuga21_contig00031597
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00031597 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300588.1| actin related protein [Populus trichocarpa] ... 99 3e-19 ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi... 88 6e-16 emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera] 88 6e-16 ref|XP_003598309.1| Actin related protein [Medicago truncatula] ... 85 5e-15 gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana] 84 2e-14 >ref|XP_002300588.1| actin related protein [Populus trichocarpa] gi|222847846|gb|EEE85393.1| actin related protein [Populus trichocarpa] Length = 473 Score = 99.4 bits (246), Expect = 3e-19 Identities = 42/67 (62%), Positives = 57/67 (85%) Frame = +1 Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQQPSGWDTIFFAEKH 411 R+P+D+ QI++ +GPK+AAR+S+VCKSWR +VSDNRLWI+FLQN + WD++FF E H Sbjct: 45 RLPIDVVLQIVRLVGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT-WDSVFFVETH 103 Query: 412 LRSGYPL 432 LRSGYP+ Sbjct: 104 LRSGYPI 110 >ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera] gi|296090034|emb|CBI39853.3| unnamed protein product [Vitis vinifera] Length = 473 Score = 88.2 bits (217), Expect = 6e-16 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 2/68 (2%) Frame = +1 Query: 235 IPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQ--QPSGWDTIFFAEK 408 IP D+F IL+FL P+E A++S+VCK W+ +VSDN+LW++ LQ + QP WD++ FAE Sbjct: 39 IPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAET 98 Query: 409 HLRSGYPL 432 HL+ GYPL Sbjct: 99 HLQMGYPL 106 >emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera] Length = 451 Score = 88.2 bits (217), Expect = 6e-16 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 2/68 (2%) Frame = +1 Query: 235 IPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQNQ--QPSGWDTIFFAEK 408 IP D+F IL+FL P+E A++S+VCK W+ +VSDN+LW++ LQ + QP WD++ FAE Sbjct: 39 IPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSWDSLVFAET 98 Query: 409 HLRSGYPL 432 HL+ GYPL Sbjct: 99 HLQMGYPL 106 >ref|XP_003598309.1| Actin related protein [Medicago truncatula] gi|355487357|gb|AES68560.1| Actin related protein [Medicago truncatula] Length = 471 Score = 85.1 bits (209), Expect = 5e-15 Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Frame = +1 Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQ-NQQPSGWDTIFFAEK 408 ++P D+ QIL+ LGPKE A++S++CKS + VSDNRLW+ FLQ +Q WD++FFAE Sbjct: 41 QLPSDILIQILRLLGPKEVAKLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVFFAET 100 Query: 409 HLRSGYPL 432 +L SGYPL Sbjct: 101 NLISGYPL 108 >gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana] Length = 387 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/68 (54%), Positives = 52/68 (76%), Gaps = 1/68 (1%) Frame = +1 Query: 232 RIPLDLFTQILKFLGPKEAARVSIVCKSWRIVVSDNRLWIFFLQ-NQQPSGWDTIFFAEK 408 ++P+D+ QIL + PK+A ++ + CK+W+ V S NRLWIF+LQ +Q+P WD+IFFAE Sbjct: 45 QLPMDILVQILMMMEPKDAVKLGLTCKAWKCVASGNRLWIFYLQCSQEP--WDSIFFAET 102 Query: 409 HLRSGYPL 432 LRSGYPL Sbjct: 103 SLRSGYPL 110