BLASTX nr result
ID: Cimicifuga21_contig00031581
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00031581
(813 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-105
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera] 385 e-105
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,... 366 3e-99
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2... 360 3e-97
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi... 355 9e-96
>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like
[Vitis vinifera]
Length = 633
Score = 385 bits (988), Expect = e-105
Identities = 180/270 (66%), Positives = 220/270 (81%)
Frame = +1
Query: 4 EPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGK 183
EPDAICWTS+ISA TRND F+EAL FY M R + + PDGFTFGT+LTACGNL R +QGK
Sbjct: 224 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 283
Query: 184 QVHAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHG 363
+VHAKVIT+G GN+VVESSL+DMYGKCG + +S+ +FDRM KN+VSW ALLG YCQ+G
Sbjct: 284 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 343
Query: 364 DFKSVLKLFREMEIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALVD 543
DFKSV+++FR+ME D+Y FGT++R CAGLA V QGKEVHCQY+RKGGW +VIVESALVD
Sbjct: 344 DFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVD 403
Query: 544 LYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPDGVT 723
LYAKCGCI+YAQ IF +PVRNLITWNSMI A +G EEA+ +F++MV G+KPD ++
Sbjct: 404 LYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYIS 463
Query: 724 FLALLAAYTHKGMVDEGSRLFRCMWSDYGI 813
F+ +L A +H+G+VDEG F M DYGI
Sbjct: 464 FIGILFACSHRGLVDEGREYFISMTKDYGI 493
Score = 165 bits (417), Expect = 1e-38
Identities = 81/232 (34%), Positives = 137/232 (59%), Gaps = 5/232 (2%)
Frame = +1
Query: 10 DAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQV 189
D I WTS+IS + R +LELF+ M Y + P+ FT ++ AC L + G+
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKM-LAYGVEPNAFTLSAVIKACSELGDLKLGRIF 183
Query: 190 HAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHGDF 369
H V+ G N V+ S+L+DM+G+ ++D+R +FD + + +A+ W +++ A ++ F
Sbjct: 184 HGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFF 243
Query: 370 KSVLKLFREME-----IKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESA 534
L+ F M+ D ++FGTV+ AC L + QGKEVH + + G GNV+VES+
Sbjct: 244 DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESS 303
Query: 535 LVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRM 690
LVD+Y KCG + +QRIF +P++N ++W++++ +G+ + I +F +M
Sbjct: 304 LVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM 355
Score = 108 bits (270), Expect = 1e-21
Identities = 69/224 (30%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Frame = +1
Query: 130 FGTILTACGNLERARQGKQVHAKVITSGLRGNLVVESSLLDMYGKCGL-IEDSRGVFDRM 306
+ ++L C + G Q+HA VI SGL + V +SLL +Y K G ++R VFD +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 307 QKKNAVSWCALLGAYCQHGDFKSVLKLFREMEIKDI----YSFGTVIRACAGLAVVIQGK 474
K+ +SW +++ Y + G + L+LF +M + ++ VI+AC+ L + G+
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 475 EVHCQYLRKGGWGNVIVESALVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHG 654
H L +G N ++ SAL+D++ + +D A+++F + + I W S+ISA +
Sbjct: 182 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 241
Query: 655 NVEEAIGLFHRMV-NSGMKPDGVTFLALLAAYTHKGMVDEGSRL 783
+EA+ F+ M + GM PDG TF +L A + G + +G +
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEV 285
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/150 (24%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Frame = +1
Query: 352 CQHGDFKSVLKLFREMEIKDIYS----FGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNV 519
C+ G+ L+L + ++ +I + + ++++ C + G ++H ++ G +
Sbjct: 35 CKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 94
Query: 520 IVESALVDLYAKCGC-IDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVN 696
V ++L+ LY K G +++F G+ V+++I+W SMIS G ++ LF +M+
Sbjct: 95 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 154
Query: 697 SGMKPDGVTFLALLAAYTHKGMVDEGSRLF 786
G++P+ T A++ A + G + G R+F
Sbjct: 155 YGVEPNAFTLSAVIKACSELGDLKLG-RIF 183
Score = 56.6 bits (135), Expect = 6e-06
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 1 PEPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQG 180
P + I W S+I F +N EEAL +F M K + PD +F IL AC + +G
Sbjct: 422 PVRNLITWNSMIGGFAQNGRGEEALRIFNQM-VKEGIKPDYISFIGILFACSHRGLVDEG 480
Query: 181 KQVHAKVITS-GLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVS-WCALLGAYC 354
++ + G++ + S ++D+ G+ GL+E++ + + ++ S W ALLGA
Sbjct: 481 REYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACT 540
Query: 355 QHGDFKSVLKLF-REMEIKDIYSFGTVIRA 441
+++ ++ R ME++ Y V+ A
Sbjct: 541 TCTNYEIAERIAKRVMELEPDYHLSYVLLA 570
>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 385 bits (988), Expect = e-105
Identities = 180/270 (66%), Positives = 220/270 (81%)
Frame = +1
Query: 4 EPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGK 183
EPDAICWTS+ISA TRND F+EAL FY M R + + PDGFTFGT+LTACGNL R +QGK
Sbjct: 283 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 342
Query: 184 QVHAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHG 363
+VHAKVIT+G GN+VVESSL+DMYGKCG + +S+ +FDRM KN+VSW ALLG YCQ+G
Sbjct: 343 EVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNG 402
Query: 364 DFKSVLKLFREMEIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALVD 543
DFKSV+++FR+ME D+Y FGT++R CAGLA V QGKEVHCQY+RKGGW +VIVESALVD
Sbjct: 403 DFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVD 462
Query: 544 LYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPDGVT 723
LYAKCGCI+YAQ IF +PVRNLITWNSMI A +G EEA+ +F++MV G+KPD ++
Sbjct: 463 LYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYIS 522
Query: 724 FLALLAAYTHKGMVDEGSRLFRCMWSDYGI 813
F+ +L A +H+G+VDEG F M DYGI
Sbjct: 523 FIGILFACSHRGLVDEGREYFISMTKDYGI 552
Score = 165 bits (417), Expect = 1e-38
Identities = 81/232 (34%), Positives = 137/232 (59%), Gaps = 5/232 (2%)
Frame = +1
Query: 10 DAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQV 189
D I WTS+IS + R +LELF+ M Y + P+ FT ++ AC L + G+
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKM-LAYGVEPNAFTLSAVIKACSELGDLKLGRIF 242
Query: 190 HAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHGDF 369
H V+ G N V+ S+L+DM+G+ ++D+R +FD + + +A+ W +++ A ++ F
Sbjct: 243 HGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFF 302
Query: 370 KSVLKLFREME-----IKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESA 534
L+ F M+ D ++FGTV+ AC L + QGKEVH + + G GNV+VES+
Sbjct: 303 DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESS 362
Query: 535 LVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRM 690
LVD+Y KCG + +QRIF +P++N ++W++++ +G+ + I +F +M
Sbjct: 363 LVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM 414
Score = 108 bits (270), Expect = 1e-21
Identities = 69/224 (30%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Frame = +1
Query: 130 FGTILTACGNLERARQGKQVHAKVITSGLRGNLVVESSLLDMYGKCGL-IEDSRGVFDRM 306
+ ++L C + G Q+HA VI SGL + V +SLL +Y K G ++R VFD +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 307 QKKNAVSWCALLGAYCQHGDFKSVLKLFREMEIKDI----YSFGTVIRACAGLAVVIQGK 474
K+ +SW +++ Y + G + L+LF +M + ++ VI+AC+ L + G+
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 475 EVHCQYLRKGGWGNVIVESALVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHG 654
H L +G N ++ SAL+D++ + +D A+++F + + I W S+ISA +
Sbjct: 241 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 300
Query: 655 NVEEAIGLFHRMV-NSGMKPDGVTFLALLAAYTHKGMVDEGSRL 783
+EA+ F+ M + GM PDG TF +L A + G + +G +
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEV 344
Score = 61.2 bits (147), Expect = 3e-07
Identities = 37/150 (24%), Positives = 79/150 (52%), Gaps = 5/150 (3%)
Frame = +1
Query: 352 CQHGDFKSVLKLFREMEIKDIYS----FGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNV 519
C+ G+ L+L + ++ +I + + ++++ C + G ++H ++ G +
Sbjct: 94 CKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDR 153
Query: 520 IVESALVDLYAKCGC-IDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVN 696
V ++L+ LY K G +++F G+ V+++I+W SMIS G ++ LF +M+
Sbjct: 154 FVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLA 213
Query: 697 SGMKPDGVTFLALLAAYTHKGMVDEGSRLF 786
G++P+ T A++ A + G + G R+F
Sbjct: 214 YGVEPNAFTLSAVIKACSELGDLKLG-RIF 242
Score = 56.6 bits (135), Expect = 6e-06
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 1 PEPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQG 180
P + I W S+I F +N EEAL +F M K + PD +F IL AC + +G
Sbjct: 481 PVRNLITWNSMIGGFAQNGRGEEALRIFNQM-VKEGIKPDYISFIGILFACSHRGLVDEG 539
Query: 181 KQVHAKVITS-GLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVS-WCALLGAYC 354
++ + G++ + S ++D+ G+ GL+E++ + + ++ S W ALLGA
Sbjct: 540 REYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACT 599
Query: 355 QHGDFKSVLKLF-REMEIKDIYSFGTVIRA 441
+++ ++ R ME++ Y V+ A
Sbjct: 600 TCTNYEIAERIAKRVMELEPDYHLSYVLLA 629
>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 483
Score = 366 bits (940), Expect = 3e-99
Identities = 173/251 (68%), Positives = 210/251 (83%), Gaps = 1/251 (0%)
Frame = +1
Query: 4 EPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGK 183
EPDAICWTSVISA+TRND +++AL FYLM RK L+PDGFTFGT+LTACGNL R +QGK
Sbjct: 216 EPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGK 275
Query: 184 QVHAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHG 363
+VHAK+ITSG GN+VVESSL+DMYGKCGL+++S+ VFDRM KN+VSW ALLG +CQ+G
Sbjct: 276 EVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNG 335
Query: 364 DFKSVLKLFREM-EIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALV 540
DF+SV+++FREM E D+YSFGTV+RACAGLA V QGKEVHCQY+R+GGW +VI+ESALV
Sbjct: 336 DFESVIRIFREMGEADDLYSFGTVLRACAGLAAVRQGKEVHCQYVRRGGWRDVIIESALV 395
Query: 541 DLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPDGV 720
DLYAKCGCID+A RIF + VRNLITWNSMI A +G EEA+ +F MV G KPD +
Sbjct: 396 DLYAKCGCIDFAHRIFTKMTVRNLITWNSMICGFAQNGWAEEALRIFDEMVKEGTKPDYI 455
Query: 721 TFLALLAAYTH 753
TF+ +L A +H
Sbjct: 456 TFIGVLFACSH 466
Score = 164 bits (415), Expect = 2e-38
Identities = 87/263 (33%), Positives = 150/263 (57%), Gaps = 5/263 (1%)
Frame = +1
Query: 10 DAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQV 189
D I WTS+I+ + + + ++AL+LF+ M + P+ FT ++ AC +L GK
Sbjct: 117 DVISWTSMITGYVKGEKPKKALDLFWEM-LDVGVDPNAFTLSAVIKACTDLGTLMLGKCF 175
Query: 190 HAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHGDF 369
H ++ G N V+ S+L+D+YG+ ++D+R +FD + + +A+ W +++ AY ++ +
Sbjct: 176 HCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRNDMY 235
Query: 370 KSVLKLFREMEIK-----DIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESA 534
L F M+ K D ++FGTV+ AC L + QGKEVH + + G GNV+VES+
Sbjct: 236 DKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVVESS 295
Query: 535 LVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPD 714
LVD+Y KCG +D +QR+F + V+N ++W++++ +G+ E I +F M G D
Sbjct: 296 LVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREM---GEADD 352
Query: 715 GVTFLALLAAYTHKGMVDEGSRL 783
+F +L A V +G +
Sbjct: 353 LYSFGTVLRACAGLAAVRQGKEV 375
Score = 114 bits (285), Expect = 3e-23
Identities = 75/256 (29%), Positives = 131/256 (51%), Gaps = 6/256 (2%)
Frame = +1
Query: 34 ISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQVHAKVITSG 213
I F ++ AL++ ++ + +S F + ++L C + G Q+HA V+ SG
Sbjct: 23 IIGFCKSGALLHALDILNSIDSR-EISNKPFIYASLLQTCTKVVSFNHGLQIHAHVVKSG 81
Query: 214 LRGNLVVESSLLDMYGKCGL-IEDSRGVFDRMQKKNAVSWCALLGAYCQHGDFKSVLKLF 390
L + V +SLL +Y K ++R VFD + ++ +SW +++ Y + K L LF
Sbjct: 82 LETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLF 141
Query: 391 REM----EIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALVDLYAKC 558
EM + ++ VI+AC L ++ GK HC + +G N ++ SAL+DLY +
Sbjct: 142 WEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYGRN 201
Query: 559 GCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNS-GMKPDGVTFLAL 735
+D A+R+F + + I W S+ISA + ++A+G F+ M G+ PDG TF +
Sbjct: 202 YELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRKLGLAPDGFTFGTV 261
Query: 736 LAAYTHKGMVDEGSRL 783
L A + + +G +
Sbjct: 262 LTACGNLRRLKQGKEV 277
Score = 59.3 bits (142), Expect = 1e-06
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Frame = +1
Query: 349 YCQHGDFKSVLKLFREMEIKDI----YSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGN 516
+C+ G L + ++ ++I + + ++++ C + G ++H ++ G +
Sbjct: 26 FCKSGALLHALDILNSIDSREISNKPFIYASLLQTCTKVVSFNHGLQIHAHVVKSGLETD 85
Query: 517 VIVESALVDLYAKCGCIDY-AQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMV 693
V ++L+ LY K + +R+F G+ R++I+W SMI+ ++A+ LF M+
Sbjct: 86 RFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALDLFWEML 145
Query: 694 NSGMKPDGVTFLALLAAYTHKGMVDEGSRLFRCM 795
+ G+ P+ T A++ A T G + G + F C+
Sbjct: 146 DVGVDPNAFTLSAVIKACTDLGTLMLG-KCFHCV 178
>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
predicted protein [Populus trichocarpa]
Length = 606
Score = 360 bits (923), Expect = 3e-97
Identities = 172/271 (63%), Positives = 212/271 (78%)
Frame = +1
Query: 1 PEPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQG 180
P+PDAICWTS+ISAFTRND +++AL FY M RK+ LSPDGFTFGT+LTACGNL R +QG
Sbjct: 224 PQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQG 283
Query: 181 KQVHAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQH 360
K+VHAKVITSGL GN+ VESSL+DMYGKC L+ S+ VFDRM KN VSW ALLG YCQ+
Sbjct: 284 KEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQN 343
Query: 361 GDFKSVLKLFREMEIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALV 540
GDF+SV+++FRE + D YSFGTV+RACAGLA V QGKEVHCQY+++ W +V+ ESALV
Sbjct: 344 GDFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALV 403
Query: 541 DLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPDGV 720
DLYAKCGCID+A RIF+ + VRNLITWNSMI A +G E LF M+ G++PD +
Sbjct: 404 DLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYI 463
Query: 721 TFLALLAAYTHKGMVDEGSRLFRCMWSDYGI 813
+F+ +L A +H G+VD+G + F M Y I
Sbjct: 464 SFVGVLFACSHAGLVDQGKKYFAAMTEVYEI 494
Score = 157 bits (398), Expect = 2e-36
Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 10/275 (3%)
Frame = +1
Query: 10 DAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQV 189
D I WTS+I+ + + + +++LELF M + P+GFT ++ AC L R GK
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEM-LGLGIEPNGFTLSAVIKACSGLGDLRLGKCF 184
Query: 190 HAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHGDF 369
H V+ G N V+ ++L+DMYG+ ++D+ VF + + +A+ W +++ A+ ++ +
Sbjct: 185 HGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVY 244
Query: 370 KSVLKLFREMEIK-----DIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESA 534
L F M K D ++FGTV+ AC L + QGKEVH + + G GNV VES+
Sbjct: 245 DKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESS 304
Query: 535 LVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPD 714
LVD+Y KC ++ +Q +F + V+NL++W +++ +G+ E I +F G K D
Sbjct: 305 LVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIF----REGKKVD 360
Query: 715 GVTFLALLAAYTHKGMVDEGSRLF-----RCMWSD 804
+F +L A V +G + RC W D
Sbjct: 361 TYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRD 395
Score = 113 bits (282), Expect = 6e-23
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Frame = +1
Query: 106 RLSPDGFTFGTILTACGNLERARQGKQVHAKVITSGLRGNLVVESSLLDMYGKCG-LIED 282
RLS F + ++L C G Q H+ I SGL + V +SLL +Y K G + +
Sbjct: 55 RLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFE 114
Query: 283 SRGVFDRMQKKNAVSWCALLGAYCQHGDFKSVLKLFREMEIKDI----YSFGTVIRACAG 450
+R VFD + K+ +SW +++ Y + K L+LF EM I ++ VI+AC+G
Sbjct: 115 ARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSG 174
Query: 451 LAVVIQGKEVHCQYLRKGGWGNVIVESALVDLYAKCGCIDYAQRIFLGIPVRNLITWNSM 630
L + GK H + +G N ++ +AL+D+Y + +D A +F+ +P + I W S+
Sbjct: 175 LGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSI 234
Query: 631 ISACANHGNVEEAIGLFHRMVNS-GMKPDGVTFLALLAAYTHKGMVDEGSRL 783
ISA + ++A+G F+ M G+ PDG TF +L A + G + +G +
Sbjct: 235 ISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEV 286
>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like
[Cucumis sativus] gi|449493172|ref|XP_004159212.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 355 bits (910), Expect = 9e-96
Identities = 165/270 (61%), Positives = 207/270 (76%)
Frame = +1
Query: 4 EPDAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGK 183
EPD +CWT+VISAFTRND +EEAL FYL +R +RL PD +TFG++LTACGNL R RQG+
Sbjct: 225 EPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGE 284
Query: 184 QVHAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHG 363
++HAKVI G GN+V ESSL+DMYGKCG +E S+ +FDRM +N+VSW ALL YC +G
Sbjct: 285 EIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNG 344
Query: 364 DFKSVLKLFREMEIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALVD 543
D++ + LFREM+ D+YSFGTVIRACAGLA V GKE+HCQY+RKGGW +VIVESALVD
Sbjct: 345 DYEKAVNLFREMKEVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVD 404
Query: 544 LYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPDGVT 723
LYAKCGCI++A R+F +P RNLITWNSMI A +G+ AI +F M+ G+KPD ++
Sbjct: 405 LYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCIS 464
Query: 724 FLALLAAYTHKGMVDEGSRLFRCMWSDYGI 813
F+ LL A +H G+VD+ F M YGI
Sbjct: 465 FIGLLFACSHTGLVDQARHYFDLMTGKYGI 494
Score = 153 bits (386), Expect = 5e-35
Identities = 82/254 (32%), Positives = 139/254 (54%), Gaps = 7/254 (2%)
Frame = +1
Query: 10 DAICWTSVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQV 189
D + W S+I+ + R A+ELF+ M + P+GFT ++ AC + GK
Sbjct: 126 DVVSWASMITGYVREGKSGIAIELFWDMLDS-GIEPNGFTLSAVIKACSEIGNLVLGKCF 184
Query: 190 HAKVITSGLRGNLVVESSLLDMYGKCGLIEDSRGVFDRMQKKNAVSWCALLGAYCQHGDF 369
H V+ G N V+ SSL+DMYG+ + D+R +FD + + + V W ++ A+ ++ +
Sbjct: 185 HGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLY 244
Query: 370 KSVLKLF-----REMEIKDIYSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESA 534
+ L F D Y+FG+V+ AC L + QG+E+H + + G GNV+ ES+
Sbjct: 245 EEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESS 304
Query: 535 LVDLYAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNSGMKPD 714
LVD+Y KCG ++ +QR+F + RN ++W+++++ ++G+ E+A+ LF M +
Sbjct: 305 LVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLYSF 364
Query: 715 GVTFLAL--LAAYT 750
G A LAA T
Sbjct: 365 GTVIRACAGLAAVT 378
Score = 102 bits (254), Expect = 1e-19
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 8/260 (3%)
Frame = +1
Query: 28 SVISAFTRNDHFEEALELFYLMNRKYRLSPDGFTFGTILTACGNLERARQGKQVHAKVIT 207
S I F ++ +AL L ++ + ++L C ++ +G+Q HA V+
Sbjct: 29 SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGRQFHAHVVK 88
Query: 208 SGLRGNLVVESSLLDMYGKCGLIEDS---RGVFDRMQKKNAVSWCALLGAYCQHGDFKSV 378
SGL + V +SLL +Y K G DS R VFD + K+ VSW +++ Y + G
Sbjct: 89 SGLETDRFVGNSLLSLYFKLG--SDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIA 146
Query: 379 LKLFREMEIKDI----YSFGTVIRACAGLAVVIQGKEVHCQYLRKGGWGNVIVESALVDL 546
++LF +M I ++ VI+AC+ + ++ GK H +R+G N ++ S+L+D+
Sbjct: 147 IELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDM 206
Query: 547 YAKCGCIDYAQRIFLGIPVRNLITWNSMISACANHGNVEEAIGLFHRMVNS-GMKPDGVT 723
Y + A+++F + + + W ++ISA + EEA+G F+ + + PD T
Sbjct: 207 YGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYT 266
Query: 724 FLALLAAYTHKGMVDEGSRL 783
F ++L A + G + +G +
Sbjct: 267 FGSVLTACGNLGRLRQGEEI 286