BLASTX nr result

ID: Cimicifuga21_contig00031571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031571
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244...   144   8e-33
ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...   137   1e-30
ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797...   125   3e-27

>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/125 (58%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
 Frame = +3

Query: 42  MVDLHIVCCMCGDIGFPDKLFQCSKCSNRFQHXXXXXXXXXXXXTAGFCDWCISKERSGK 221
           MVDL  VCCMCGD+GFPDKLF C+KC +RFQH                CDWC S+ER+ +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFCCNKCRHRFQHSYCSNYYRELSEPIELCDWCQSEERNAR 60

Query: 222 HVASSKKSIVKE--AGMANRSDYSNEKIKQNEREEN-AEKGKNASGAPSPRQAGRRYKSL 392
           H  SSKKS+      G+ NRS+YS +KIKQ++RE++ AEKGK+ SGAPSPR A RRYK L
Sbjct: 61  HGNSSKKSVTGHDIGGVTNRSEYSGDKIKQHDREDSTAEKGKSPSGAPSPRTATRRYKLL 120

Query: 393 KDVMC 407
           KDVMC
Sbjct: 121 KDVMC 125


>ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244418 [Vitis vinifera]
           gi|297734566|emb|CBI16617.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score =  144 bits (363), Expect = 8e-33
 Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
 Frame = +3

Query: 42  MVDLHI--VCCMCGDIGFPDKLFQCSKCSNRFQHXXXXXXXXXXXXTAGFCDWCISKERS 215
           MVD     VCCMCGD+GF DKLF+C KC NRFQH                CDWC ++ERS
Sbjct: 1   MVDFQTATVCCMCGDVGFSDKLFRCHKCRNRFQHSYCSNYYSESSERMEVCDWCQTEERS 60

Query: 216 G-KHVASSKKSIVK-EAGMANRSDYSNEKIKQNEREENAEKGKNASGAPSPRQAGRRYKS 389
             +H +SSKKS+   EAG+ +RS+YS +KIKQ++REE+ EKGKN SGAPSPR   RRYK 
Sbjct: 61  ATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDREESGEKGKNPSGAPSPRPTTRRYKL 120

Query: 390 LKDVMC 407
           LKDVMC
Sbjct: 121 LKDVMC 126


>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  139 bits (350), Expect = 3e-31
 Identities = 71/131 (54%), Positives = 86/131 (65%), Gaps = 9/131 (6%)
 Frame = +3

Query: 42  MVDLHIVCCMCGDIGFPDKLFQCSKCSNRFQHXXXXXXXXXXXXTAGFCDWCISKERSGK 221
           MVDL  VCCMCGD+GFPDKLF+C+KC NRFQH                CDWC S+ER+ +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRNRFQHSYCSNYYSEFSEPIELCDWCQSEERNAR 60

Query: 222 HVASSKKSIVKEAG---MANRSDYSNE-KIKQNEREENA-----EKGKNASGAPSPRQAG 374
           H  SSKKS     G   +  RS+Y+ + KIKQ++REEN+     +KGKN SG PSPR + 
Sbjct: 61  HGNSSKKSGAGHDGGIVVTKRSEYTGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPST 120

Query: 375 RRYKSLKDVMC 407
           RRYK LKDVMC
Sbjct: 121 RRYKLLKDVMC 131


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/131 (53%), Positives = 85/131 (64%), Gaps = 9/131 (6%)
 Frame = +3

Query: 42  MVDLHIVCCMCGDIGFPDKLFQCSKCSNRFQHXXXXXXXXXXXXTAGFCDWCISKERSGK 221
           MVD+  VCCMCGD+GFPDKLF+C+KC NRFQH                CDWC S+ER+ +
Sbjct: 1   MVDIQTVCCMCGDVGFPDKLFRCNKCRNRFQHLYCSNYYGEFSEPIEQCDWCQSEERNAR 60

Query: 222 HVASSKKSIVKEAG---MANRSDYSNE-KIKQNEREENA-----EKGKNASGAPSPRQAG 374
           H  SSKKS  +      +  RS+YS + KIKQ++REEN+     +KGKN SG PSPR   
Sbjct: 61  HGNSSKKSGAEHDSGTLVTKRSEYSGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPTT 120

Query: 375 RRYKSLKDVMC 407
           RRYK LKDVMC
Sbjct: 121 RRYKLLKDVMC 131


>ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797722 [Glycine max]
          Length = 126

 Score =  125 bits (315), Expect = 3e-27
 Identities = 68/129 (52%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
 Frame = +3

Query: 42  MVDLHIVCCMCGDIGFPDKLFQCSKCSNRFQHXXXXXXXXXXXXTAGFCDWCISKERSGK 221
           MVDL  VCCMCGD+GFPDKLF+C+KC NRFQH                CDWC S+E++ +
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRNRFQHSYCSNYYGELPDIE-LCDWCHSEEKNLR 59

Query: 222 HVASSKKSIV---KEAGMANRSDYSNEK-IKQNE---REENAEKGKNASGAPSPRQAGRR 380
           H+ S+ K  V    EAG  +RS+YS EK IKQ++    E  +EKGK  S  PSPR   RR
Sbjct: 60  HIGSNSKKPVSAGNEAGATHRSEYSGEKMIKQHDHHREESGSEKGK--SPTPSPRPGTRR 117

Query: 381 YKSLKDVMC 407
           YK LKDVMC
Sbjct: 118 YKLLKDVMC 126


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