BLASTX nr result

ID: Cimicifuga21_contig00031556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031556
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera]    47   2e-08
emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]    46   4e-08
emb|CCH50966.1| T4.5 [Malus x robusta]                                 54   1e-07
emb|CAN61827.1| hypothetical protein VITISV_027629 [Vitis vinifera]    46   1e-07
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]    37   2e-07

>emb|CAN75351.1| hypothetical protein VITISV_031045 [Vitis vinifera]
          Length = 300

 Score = 47.4 bits (111), Expect(2) = 2e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = -2

Query: 275 YNTQPGPDQTSPFALNQMCQYMYFP*TSCITAVKRISRYLKGNIEHGL-LHTNGPLILVG 99
           Y T   PD +  F++N +CQ+M+ P      A+KRI RY+KG   HGL LH      L+G
Sbjct: 100 YLTITSPDLS--FSVNSICQFMHAPTEDHFRALKRILRYVKGTAHHGLQLHKQSTRDLLG 157

Query: 98  FSMLFGQDVLRIGDLQVVFCIYYSPNLIS 12
           +S                + I++  NLIS
Sbjct: 158 YSDADWDGCPDTRRSTTGYAIFFGANLIS 186



 Score = 35.8 bits (81), Expect(2) = 2e-08
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 454 LYHTITYILQRTSKGLFLCQSKYIFDLLNWASMTNAK 344
           L++ +   +Q   KGLFL Q+KY  DLL  ASM +AK
Sbjct: 30  LHYFLGVEVQANEKGLFLSQTKYALDLLQRASMIDAK 66


>emb|CAN65555.1| hypothetical protein VITISV_009833 [Vitis vinifera]
          Length = 325

 Score = 46.2 bits (108), Expect(2) = 4e-08
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = -2

Query: 275 YNTQPGPDQTSPFALNQMCQYMYFP*TSCITAVKRISRYLKGNIEHGL-LHTNGPLILVG 99
           Y T   PD +  F++N +CQ+M+ P      A+KRI RY+KG   HGL LH      L+G
Sbjct: 100 YLTITRPDLS--FSVNSICQFMHAPTEDHFCALKRILRYVKGTAHHGLQLHKQSTRDLLG 157

Query: 98  FSMLFGQDVLRIGDLQVVFCIYYSPNLIS 12
           +S                + I++  NLIS
Sbjct: 158 YSDADWAGCPDTRRSTTGYAIFFGANLIS 186



 Score = 35.8 bits (81), Expect(2) = 4e-08
 Identities = 18/37 (48%), Positives = 24/37 (64%)
 Frame = -3

Query: 454 LYHTITYILQRTSKGLFLCQSKYIFDLLNWASMTNAK 344
           L++ +   +Q   KGLFL Q+KY  DLL  ASM +AK
Sbjct: 30  LHYFLGVEVQANEKGLFLSQTKYALDLLQRASMIDAK 66


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 53.9 bits (128), Expect(2) = 1e-07
 Identities = 35/88 (39%), Positives = 45/88 (51%)
 Frame = -2

Query: 275  YNTQPGPDQTSPFALNQMCQYMYFP*TSCITAVKRISRYLKGNIEHGLLHTNGPLILVGF 96
            Y T   PD    FA+NQ+CQYM+ P T  + AVKRI RYLKG ++ GL  T G   L  +
Sbjct: 1443 YLTWTRPDLA--FAVNQVCQYMHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQCLTAW 1500

Query: 95   SMLFGQDVLRIGDLQVVFCIYYSPNLIS 12
            S                +C++   NLIS
Sbjct: 1501 SDADWAGCPVDRRSTSGYCVFLGSNLIS 1528



 Score = 26.6 bits (57), Expect(2) = 1e-07
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 430  LQRTSKGLFLCQSKYIFDLLNWASMTNAK 344
            + ++ +GL L Q+KY  DLL    M  AK
Sbjct: 1382 VHKSDQGLLLHQAKYALDLLKKTDMLGAK 1410


>emb|CAN61827.1| hypothetical protein VITISV_027629 [Vitis vinifera]
          Length = 638

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
 Frame = -2

Query: 275 YNTQPGPDQTSPFALNQMCQYMYFP*TSCITAVKRISRYLKGNIEHGL-LHTNGPLILVG 99
           Y T   PD +  F++N +CQ+M+ P      A+KRI RY+KG   HGL LH      L+G
Sbjct: 413 YLTITRPDLS--FSVNSICQFMHAPTEDHFRALKRILRYVKGXAHHGLQLHKQSTRDLLG 470

Query: 98  FSMLFGQDVLRIGDLQVVFCIYYSPNLIS 12
           +S                + I++  NLIS
Sbjct: 471 YSDADWAGCPDXRRSTTGYAIFFGANLIS 499



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -3

Query: 454 LYHTITYILQRTSKGLFLCQSKYIFDLLNWASMTNAK 344
           L++ +   +Q   KGLFL Q KY  DLL  ASM +AK
Sbjct: 343 LHYFLRVEVQANEKGLFLNQMKYALDLLQRASMIDAK 379


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score = 37.0 bits (84), Expect(3) = 2e-07
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -2

Query: 218  QYMYFP*TSCITAVKRISRYLKGNIEHGLLHT-NGPLILVGFS 93
            QY+  P ++   AV RI RYLKG + HGL ++   PL+L  FS
Sbjct: 1077 QYLSAPRSTHYAAVLRILRYLKGTLFHGLFYSAQSPLVLRAFS 1119



 Score = 32.0 bits (71), Expect(3) = 2e-07
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 108  LSGFFNVVWAGCPTDRRPTSGVLYLL 31
            L  F +  WAG PTDRR T+G  +LL
Sbjct: 1115 LRAFSDADWAGDPTDRRSTTGYCFLL 1140



 Score = 29.6 bits (65), Expect(3) = 2e-07
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -3

Query: 457  HLYHTITYILQRTSKGLFLCQSKYIFDLLNWASMTNAKFV 338
            HL + +   +  ++ GL++ Q+KY  +LL+ A +T++K V
Sbjct: 1032 HLSYFLGLEITHSTDGLYITQAKYASNLLSQAGLTDSKTV 1071


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