BLASTX nr result

ID: Cimicifuga21_contig00031529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031529
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   147   1e-33
ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   144   1e-32
emb|CBI34670.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...   113   2e-23

>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  147 bits (371), Expect = 1e-33
 Identities = 83/186 (44%), Positives = 113/186 (60%)
 Frame = -3

Query: 561 SLSEDTNALSDVSKSCTELDTPDFQDVSFRFPSTPASNMARNMSLDGSFDINMDLKDRKY 382
           SL+ D NA S V K C+++         F  PS+P   + R  S DG F+I ++L +R+ 
Sbjct: 326 SLNSDLNA-SSVRKPCSQV---------FSLPSSPGHFLTRGGSSDGFFEIGLNLDNREN 375

Query: 381 CTSGTVGGGWREQSKFKCEQTIGPLNDSNGLAERDTFFTLHKSSSEKVGMPHSPGRTESD 202
            ++ +        SKFKC+  +GP NDSN L ER+T  TL+KS S KV +PHSP ++ESD
Sbjct: 376 HSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESD 435

Query: 201 HSKDSPKARFTPFRRLLDPIMKSKSLRSSPVSRAELGDSATVGLENFTRNKTFRKSLLND 22
           +S+ SPKARF P R++ DP  KSKS R SP+         T G  +   NKTFRKSLL+D
Sbjct: 436 YSRTSPKARFNPIRKMFDPFTKSKSQR-SPLHSVVKPGGVTKGPASGRNNKTFRKSLLHD 494

Query: 21  FSKTTR 4
           F+ TT+
Sbjct: 495 FANTTQ 500


>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  144 bits (363), Expect = 1e-32
 Identities = 82/186 (44%), Positives = 112/186 (60%)
 Frame = -3

Query: 561 SLSEDTNALSDVSKSCTELDTPDFQDVSFRFPSTPASNMARNMSLDGSFDINMDLKDRKY 382
           SL+ D NA S V K C+++         F  PS+P   + R  S DG  +I ++L +R+ 
Sbjct: 147 SLNSDLNA-SSVRKPCSQV---------FSLPSSPGHFLTRGGSSDGFSEIGLNLDNREN 196

Query: 381 CTSGTVGGGWREQSKFKCEQTIGPLNDSNGLAERDTFFTLHKSSSEKVGMPHSPGRTESD 202
            ++ +        SKFKC+  +GP NDSN L ER+T  TL+KS S KV +PHSP ++ESD
Sbjct: 197 HSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESD 256

Query: 201 HSKDSPKARFTPFRRLLDPIMKSKSLRSSPVSRAELGDSATVGLENFTRNKTFRKSLLND 22
           +S+ SPKARF P R++ DP  KSKS R SP+         T G  +   NKTFRKSLL+D
Sbjct: 257 YSRTSPKARFNPIRKMFDPFTKSKSQR-SPLHSVVKPGGVTKGPASGRNNKTFRKSLLHD 315

Query: 21  FSKTTR 4
           F+ TT+
Sbjct: 316 FANTTQ 321


>emb|CBI34670.3| unnamed protein product [Vitis vinifera]
          Length = 1085

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/113 (54%), Positives = 78/113 (69%)
 Frame = -3

Query: 342  SKFKCEQTIGPLNDSNGLAERDTFFTLHKSSSEKVGMPHSPGRTESDHSKDSPKARFTPF 163
            SKFKC+  +GP NDSN L ER+T  TL+KS S KV +PHSP ++ESD+S+ SPKARF P 
Sbjct: 706  SKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFNPI 765

Query: 162  RRLLDPIMKSKSLRSSPVSRAELGDSATVGLENFTRNKTFRKSLLNDFSKTTR 4
            R++ DP  KSKS R SP+         T G  +   NKTFRKSLL+DF+ TT+
Sbjct: 766  RKMFDPFTKSKSQR-SPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQ 817


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  116 bits (290), Expect = 3e-24
 Identities = 78/192 (40%), Positives = 100/192 (52%), Gaps = 14/192 (7%)
 Frame = -3

Query: 534 SDVSKSCTELDTPDFQDVSFRFPSTPASNMARNM-------------SLDGSFDINMDLK 394
           SD S S   +D+    D       +PAS+++ N+             S D   +I  +L 
Sbjct: 115 SDTSFSFRIVDSLHCLDEETLQKRSPASSVSSNLNPKSVRRPCIEPCSSDDFTEICPNLD 174

Query: 393 DRKYCTSGTVGGGWREQSKFKCEQTIGPLNDSNGLAERDTFFTLHKSSSEKVGMPHSPGR 214
            R   ++G VG        FKCEQ +GPLND N L ERDT  T  KS S KV +P SP  
Sbjct: 175 KRDKHSAGIVGSDSIGNPNFKCEQVVGPLNDGNELLERDTALTFQKSLSAKVEIPCSPSS 234

Query: 213 TESDHSKD-SPKARFTPFRRLLDPIMKSKSLRSSPVSRAELGDSATVGLENFTRNKTFRK 37
           + S  S   S K+RF+P R + DP  KSKSLRS      E GD+ T G+ N  RN+TFRK
Sbjct: 235 SGSYLSNGASSKSRFSPMRMMFDPFTKSKSLRSPLGHVPEPGDAKTTGMSNMRRNQTFRK 294

Query: 36  SLLNDFSKTTRK 1
            L +DFS T +K
Sbjct: 295 YLFHDFSHTDQK 306


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score =  113 bits (283), Expect = 2e-23
 Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 DGSFDINMDLKDRKYCTSGTVGGGWREQSKFKCEQTIGPLNDSNGLAERDTFFTLHKSSS 247
           D  F+I  +L  R+   +GTV     E    + EQ +GP ND+N L ++D   T H+S S
Sbjct: 159 DDFFEICPNLDKREKQLAGTVRRDSIENPTLRSEQVVGPTNDANDLLDKDIALTFHRSHS 218

Query: 246 EKVGMPHSPGRTESD-HSKDSPKARFTPFRRLLDPIMKSKSLRSSPVSRAELGDSATVGL 70
            KV MP+SP  +ESD  SK S K+RF+P +++ DP MKSKSLRS    +AE  D     +
Sbjct: 219 VKVEMPYSPSPSESDCSSKASSKSRFSPIKKMFDPFMKSKSLRSPLGFKAEPRDVKITEM 278

Query: 69  ENFTRNKTFRKSLLNDFSKTTRK 1
            N  +N+  RKS+LNDFS TT K
Sbjct: 279 SNIRKNQILRKSVLNDFSHTTGK 301


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