BLASTX nr result

ID: Cimicifuga21_contig00031518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031518
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP22000.1| endopolygalacturonase [Prunus persica]                  94   9e-18
gb|AAX09642.1| polygalacturonase [Malus x domestica]                   92   6e-17
emb|CAH18929.1| polygalacturonase [Pyrus communis]                     91   7e-17
dbj|BAC22688.1| polygalacturonase [Pyrus communis] gi|82949281|d...    91   7e-17
sp|P48978.1|PGLR_MALDO RecName: Full=Polygalacturonase; Short=PG...    91   1e-16

>gb|AAP22000.1| endopolygalacturonase [Prunus persica]
          Length = 124

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/61 (68%), Positives = 53/61 (86%)
 Frame = +1

Query: 7   IKIQDAQQVHLLFQKCVNVQALNLEVSAPEASPNSDGIHVTETQNIQIINSVISTGDNCI 186
           + IQDAQQ+H+ FQKC+NVQA NL + APE SPN+DGIHVT+TQNI I NSVI+TGD+C+
Sbjct: 44  LNIQDAQQIHVSFQKCMNVQASNLSIIAPEKSPNTDGIHVTDTQNILITNSVIATGDDCL 103

Query: 187 T 189
           +
Sbjct: 104 S 104


>gb|AAX09642.1| polygalacturonase [Malus x domestica]
          Length = 292

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +1

Query: 1   RKIKIQDAQQVHLLFQKCVNVQALNLEVSAPEASPNSDGIHVTETQNIQIINSVISTGDN 180
           + + IQDAQQ+H++FQ C+NVQA  L V+APE SPN+DGIHVT TQNI I +SVI TGD+
Sbjct: 93  KNLNIQDAQQIHVIFQNCINVQASRLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDD 152

Query: 181 CIT 189
           CI+
Sbjct: 153 CIS 155


>emb|CAH18929.1| polygalacturonase [Pyrus communis]
          Length = 460

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = +1

Query: 1   RKIKIQDAQQVHLLFQKCVNVQALNLEVSAPEASPNSDGIHVTETQNIQIINSVISTGDN 180
           + +KIQDAQQ+H+ FQ C+NVQA  L V+APE SPN+DGIHVT TQNI I +SVI TGD+
Sbjct: 234 KNLKIQDAQQMHVRFQNCINVQASRLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDD 293

Query: 181 CIT 189
           CI+
Sbjct: 294 CIS 296


>dbj|BAC22688.1| polygalacturonase [Pyrus communis] gi|82949281|dbj|BAE53368.1|
           polygalacturonase-1 [Pyrus communis]
          Length = 460

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/63 (66%), Positives = 52/63 (82%)
 Frame = +1

Query: 1   RKIKIQDAQQVHLLFQKCVNVQALNLEVSAPEASPNSDGIHVTETQNIQIINSVISTGDN 180
           + +KIQDAQQ+H+ FQ C+NVQA  L V+APE SPN+DGIHVT TQNI I +SVI TGD+
Sbjct: 234 KNLKIQDAQQMHVRFQNCINVQASRLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDD 293

Query: 181 CIT 189
           CI+
Sbjct: 294 CIS 296


>sp|P48978.1|PGLR_MALDO RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
           Flags: Precursor gi|456092|gb|AAA74452.1| poly
           [1,4-a-D-galacturonide] glycan hydrolase [Malus x
           domestica]
          Length = 460

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/63 (65%), Positives = 52/63 (82%)
 Frame = +1

Query: 1   RKIKIQDAQQVHLLFQKCVNVQALNLEVSAPEASPNSDGIHVTETQNIQIINSVISTGDN 180
           + + IQDAQQ+H++FQ C+NVQA  L V+APE SPN+DGIHVT TQNI I +SVI TGD+
Sbjct: 234 KNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDD 293

Query: 181 CIT 189
           CI+
Sbjct: 294 CIS 296


Top