BLASTX nr result
ID: Cimicifuga21_contig00031493
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00031493 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244... 108 3e-22 ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu... 104 9e-21 emb|CBI18563.3| unnamed protein product [Vitis vinifera] 103 2e-20 emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] 102 3e-20 ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g... 98 6e-19 >ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera] Length = 332 Score = 108 bits (271), Expect = 3e-22 Identities = 52/77 (67%), Positives = 60/77 (77%) Frame = -2 Query: 286 FLHGDVQNTAIQELYQRLRSSVNYYPDHSSATMSNVNPMLTSSSSITEHAPISGGEFGSW 107 F+ G+VQNT IQELYQRLRSS NYY DHS +SN ++SSSSI E API+GGE G W Sbjct: 259 FILGEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNA---VSSSSSILESAPIAGGELGYW 315 Query: 106 NAPFSWSDVPSTNGAYP 56 N FSWSD+P+TNGAYP Sbjct: 316 NPTFSWSDLPTTNGAYP 332 >ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis] gi|223538418|gb|EEF40024.1| zinc finger protein, putative [Ricinus communis] Length = 335 Score = 104 bits (259), Expect = 9e-21 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%) Frame = -2 Query: 286 FLHGDVQNTAIQELYQRLRSSVN-YYPDHSSATMSNVNPMLTSSSSITEHAPISGGEFGS 110 F+ G+ QN+ IQELYQRLRSS N YY D+SS +SNV TSSS+I E +P++GGE G Sbjct: 258 FIVGEAQNSGIQELYQRLRSSTNTYYTDNSSVVLSNVGSSSTSSSNILESSPVAGGELGY 317 Query: 109 WNAPFSWSDVPSTNGAYP 56 WN FSWSD+P+TNGAYP Sbjct: 318 WNPTFSWSDLPTTNGAYP 335 >emb|CBI18563.3| unnamed protein product [Vitis vinifera] Length = 425 Score = 103 bits (256), Expect = 2e-20 Identities = 52/94 (55%), Positives = 62/94 (65%), Gaps = 17/94 (18%) Frame = -2 Query: 286 FLHGDVQNTAIQELYQRLRSSVNYYPDHSSATMSN-----------------VNPMLTSS 158 F+ G+VQNT IQELYQRLRSS NYY DHS +SN ++ ++SS Sbjct: 332 FILGEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAVSSSSSILESAPIAGVLSNAVSSS 391 Query: 157 SSITEHAPISGGEFGSWNAPFSWSDVPSTNGAYP 56 SSI E API+GGE G WN FSWSD+P+TNGAYP Sbjct: 392 SSILESAPIAGGELGYWNPTFSWSDLPTTNGAYP 425 >emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera] Length = 309 Score = 102 bits (254), Expect = 3e-20 Identities = 49/71 (69%), Positives = 55/71 (77%) Frame = -2 Query: 268 QNTAIQELYQRLRSSVNYYPDHSSATMSNVNPMLTSSSSITEHAPISGGEFGSWNAPFSW 89 QNT IQELYQRLRSS NYY DHS +SN ++SSSSI E API+GGE G WN FSW Sbjct: 242 QNTGIQELYQRLRSSTNYYTDHSPVVLSNA---VSSSSSILESAPIAGGELGYWNPTFSW 298 Query: 88 SDVPSTNGAYP 56 SD+P+TNGAYP Sbjct: 299 SDLPTTNGAYP 309 >ref|XP_002310753.1| f-box family protein [Populus trichocarpa] gi|118482074|gb|ABK92968.1| unknown [Populus trichocarpa] gi|222853656|gb|EEE91203.1| f-box family protein [Populus trichocarpa] Length = 323 Score = 98.2 bits (243), Expect = 6e-19 Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Frame = -2 Query: 286 FLHGDVQNTAIQELYQRLRSSVNYYPDHSSA-TMSNV-NPMLTSSSSITEHAPISGGEFG 113 F G+ QN+ IQELYQRLRSS NYY D+ SA +SNV TS+S+I E AP++GGE G Sbjct: 245 FTVGEAQNSGIQELYQRLRSSTNYYTDNPSAIVLSNVATSSSTSTSTILESAPVAGGELG 304 Query: 112 SWNAPFSWSDVPSTNGAYP 56 WN FSWSD+P+TNGAYP Sbjct: 305 YWNPAFSWSDLPTTNGAYP 323