BLASTX nr result

ID: Cimicifuga21_contig00031491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031491
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...    64   2e-08
ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...    63   3e-08
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                   62   8e-08
ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ...    57   1e-06

>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +1

Query: 328  QLKSGPYFHISSPQHLQAVSPRASQHSSPQTDQQSLISSTLSKSGTPLQ 474
            Q+K G  F ISSPQ LQA SP+ +QHSSPQ DQQ+L+SS L+K+GTPLQ
Sbjct: 953  QMKPGASFPISSPQLLQAASPQLTQHSSPQIDQQNLLSS-LTKTGTPLQ 1000


>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = +1

Query: 328  QLKSGPYFHISSPQHLQAVSPRASQHSSPQTDQQSLISSTLSKSGTPLQ 474
            QLKSG  F ISSPQ LQ  SP+  QHSSPQ DQQ+L++S L+K+GTPLQ
Sbjct: 1241 QLKSGTSFPISSPQLLQTASPQIPQHSSPQIDQQNLLTS-LTKAGTPLQ 1288


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = +1

Query: 322  SHQ-LKSGPYFHISSPQHLQAVSPRASQHSSPQTDQQSLISSTLSKSGTPLQ 474
            SHQ LK G  F ISSPQ LQ  SP+  QHSSPQ DQQ+L+ S ++KSGTPLQ
Sbjct: 973  SHQPLKPGAQFPISSPQLLQTASPQIPQHSSPQVDQQNLLQS-ITKSGTPLQ 1023


>ref|XP_002298206.1| predicted protein [Populus trichocarpa] gi|222845464|gb|EEE83011.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = +1

Query: 328 QLKSGPYFHISSPQHLQAVSPRASQHSSPQTDQQSLISSTLSKSGTPLQ 474
           Q+K G  F ISSPQ LQ  SP+  QHSSPQ DQQ+L+ S L+K+GTPLQ
Sbjct: 349 QMKPGSSFPISSPQMLQHASPQLQQHSSPQIDQQNLLPS-LTKTGTPLQ 396


>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
            gi|355487003|gb|AES68206.1| hypothetical protein
            MTR_2g104400 [Medicago truncatula]
          Length = 1289

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +1

Query: 328  QLKSGPYFHISSPQHLQAVSPRASQHSSPQTDQQSLISSTLSKSGTPLQ 474
            QLK GP F +SSPQ LQA SP+ SQHSSPQ DQQ+ + S ++K GTP+Q
Sbjct: 863  QLKQGP-FPVSSPQLLQATSPQISQHSSPQVDQQNHLPS-VTKVGTPMQ 909


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