BLASTX nr result

ID: Cimicifuga21_contig00031489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031489
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531573.1| set domain protein, putative [Ricinus commun...    67   3e-09
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    65   1e-08
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    65   1e-08
ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containin...    62   1e-07
ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07

>ref|XP_002531573.1| set domain protein, putative [Ricinus communis]
            gi|223528803|gb|EEF30809.1| set domain protein, putative
            [Ricinus communis]
          Length = 1058

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = -1

Query: 461  DSKKLWLYEDPLGRKQGPFSLKQLRI*TSSGHFSVHLRIWRSSEPRAVSRRLVDVLEG 288
            +++K+WLY+DP G+ QGPFS+ QLR  +S GHF  H R+WR+ E +  S  L D L+G
Sbjct: 995  ETQKMWLYQDPSGKIQGPFSIVQLRKWSSKGHFPPHFRVWRTGEKQDDSILLTDALDG 1052


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 48/73 (65%)
 Frame = -1

Query: 461  DSKKLWLYEDPLGRKQGPFSLKQLRI*TSSGHFSVHLRIWRSSEPRAVSRRLVDVLEGAS 282
            +S+K+W Y+DP G+ QGPFS+ QLR  +++G+F   LRIWR S+ +  S  L DVL G  
Sbjct: 890  ESEKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKI 949

Query: 281  SSEKLISNQRVDV 243
            S +  +++  + V
Sbjct: 950  SKDTPLTSNSLQV 962


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/73 (42%), Positives = 48/73 (65%)
 Frame = -1

Query: 461  DSKKLWLYEDPLGRKQGPFSLKQLRI*TSSGHFSVHLRIWRSSEPRAVSRRLVDVLEGAS 282
            +S+K+W Y+DP G+ QGPFS+ QLR  +++G+F   LRIWR S+ +  S  L DVL G  
Sbjct: 890  ESEKIWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKI 949

Query: 281  SSEKLISNQRVDV 243
            S +  +++  + V
Sbjct: 950  SKDTPLTSNSLQV 962


>ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Cucumis sativus] gi|449515257|ref|XP_004164666.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           44-like [Cucumis sativus]
          Length = 1201

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/82 (37%), Positives = 48/82 (58%)
 Frame = -1

Query: 467 NADSKKLWLYEDPLGRKQGPFSLKQLRI*TSSGHFSVHLRIWRSSEPRAVSRRLVDVLEG 288
           +A+ +++W Y+DP G+ QGPFS+ QLR   +SGHF+  LR+WR +E +  S  L + L G
Sbjct: 745 DAEVERIWQYQDPTGKVQGPFSMTQLRNWNNSGHFTPDLRVWRITESQNDSVLLTNALNG 804

Query: 287 ASSSEKLISNQRVDVVSSGVSS 222
             +    I      ++S G  S
Sbjct: 805 CYNKASSIWQPNNHLLSLGRGS 826


>ref|XP_002313012.1| predicted protein [Populus trichocarpa] gi|222849420|gb|EEE86967.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -1

Query: 461 DSKKLWLYEDPLGRKQGPFSLKQLRI*TSSGHFSVHLRIWRSSEPRAVSRRLVDVLEGAS 282
           +++K+W Y+DP G+ QGPFS+ QLR  +++G+F   LRIWR++E +  S  L D L G  
Sbjct: 179 EAEKIWHYKDPSGKNQGPFSMVQLRKWSNTGYFPADLRIWRNTETKDDSILLTDALSGNF 238

Query: 281 SSE 273
            S+
Sbjct: 239 QSD 241


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