BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031488
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-149
emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]   533   e-149
ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   509   e-142
ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containi...   482   e-134

>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
            [Vitis vinifera]
          Length = 632

 Score =  533 bits (1374), Expect = e-149
 Identities = 267/389 (68%), Positives = 310/389 (79%), Gaps = 2/389 (0%)
 Frame = -2

Query: 1162 DTFTCSFVLKASSLLSHLPTGHVVHALVEKLGFQSDLFLQNTLLHMYTRCCGSV--AHHF 989
            DTFTCS VL+A   L  L  G ++H +VEK+GF+S+L+LQN ++H+Y  C G +  A   
Sbjct: 127  DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASC-GEMGEARLL 185

Query: 988  FDKMPQRDVVSWNIMTTHLTKQPDGILSAHALFDQMPKRSVRSWTAMIAGYVQCGKPKEA 809
            F+KMPQRDVV+WNIM   L KQ D    A+ LF +MP+R+VRSWT+MIAGYVQCGK KEA
Sbjct: 186  FEKMPQRDVVTWNIMIAQLIKQGDHE-GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEA 244

Query: 808  IRLFTQMEEAGGKPNEXXXXXXXXXXXXXXXXXXGMRVHDYLNKCGFGRNVRVRNTLIDM 629
            I LF +MEEAG K NE                  GMR+H+Y N+ GF RNVR+ NTLIDM
Sbjct: 245  IHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDM 304

Query: 628  YIKCGCFKIARKVFDEMEERTVVSWSTMIGGHAIHGQGEEALKLFSKMLRIGIRPNGITF 449
            Y+KCGC + A KVF+EMEERTVVSWS MIGG A+HG+ EEAL+LFS M ++GI PNG+TF
Sbjct: 305  YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 364

Query: 448  IGLLHACSHMGLIDEGRRFFSCMTRDYGIIPQIEHYGCMVDLLSRSGLLQEAYEFINNMP 269
            IGLLHACSHMGLI EGRRFF+ MTRDYGIIPQIEHYGCMVDLLSR+GLL EA+EFI NMP
Sbjct: 365  IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424

Query: 268  VKPNGVVWGALLGGCKLHKNVELAEEAIRHLLVLDPLNDGYYVVLSNIYADAERWEDTAR 89
            +KPNGVVWGALLG C++HKNVE+AEEAI+HLL LDPLNDGYYVVLSNIYA+A RWEDTAR
Sbjct: 425  MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTAR 484

Query: 88   VRKLMKDQGVKKTPGRSSILADGVVHEFV 2
            VRK MKD+ VKKTPG SSI  DGVVHEFV
Sbjct: 485  VRKFMKDRQVKKTPGWSSITVDGVVHEFV 513


>emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  533 bits (1374), Expect = e-149
 Identities = 267/389 (68%), Positives = 310/389 (79%), Gaps = 2/389 (0%)
 Frame = -2

Query: 1162 DTFTCSFVLKASSLLSHLPTGHVVHALVEKLGFQSDLFLQNTLLHMYTRCCGSV--AHHF 989
            DTFTCS VL+A   L  L  G ++H +VEK+GF+S+L+LQN ++H+Y  C G +  A   
Sbjct: 127  DTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASC-GEMGEARLL 185

Query: 988  FDKMPQRDVVSWNIMTTHLTKQPDGILSAHALFDQMPKRSVRSWTAMIAGYVQCGKPKEA 809
            F+KMPQRDVV+WNIM   L KQ D    A+ LF +MP+R+VRSWT+MIAGYVQCGK KEA
Sbjct: 186  FEKMPQRDVVTWNIMIAQLIKQGDHE-GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEA 244

Query: 808  IRLFTQMEEAGGKPNEXXXXXXXXXXXXXXXXXXGMRVHDYLNKCGFGRNVRVRNTLIDM 629
            I LF +MEEAG K NE                  GMR+H+Y N+ GF RNVR+ NTLIDM
Sbjct: 245  IHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDM 304

Query: 628  YIKCGCFKIARKVFDEMEERTVVSWSTMIGGHAIHGQGEEALKLFSKMLRIGIRPNGITF 449
            Y+KCGC + A KVF+EMEERTVVSWS MIGG A+HG+ EEAL+LFS M ++GI PNG+TF
Sbjct: 305  YVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTF 364

Query: 448  IGLLHACSHMGLIDEGRRFFSCMTRDYGIIPQIEHYGCMVDLLSRSGLLQEAYEFINNMP 269
            IGLLHACSHMGLI EGRRFF+ MTRDYGIIPQIEHYGCMVDLLSR+GLL EA+EFI NMP
Sbjct: 365  IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424

Query: 268  VKPNGVVWGALLGGCKLHKNVELAEEAIRHLLVLDPLNDGYYVVLSNIYADAERWEDTAR 89
            +KPNGVVWGALLG C++HKNVE+AEEAI+HLL LDPLNDGYYVVLSNIYA+A RWEDTAR
Sbjct: 425  MKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTAR 484

Query: 88   VRKLMKDQGVKKTPGRSSILADGVVHEFV 2
            VRK MKD+ VKKTPG SSI  DGVVHEFV
Sbjct: 485  VRKFMKDRQVKKTPGWSSITVDGVVHEFV 513


>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  510 bits (1313), Expect = e-142
 Identities = 253/389 (65%), Positives = 304/389 (78%), Gaps = 2/389 (0%)
 Frame = -2

Query: 1162 DTFTCSFVLKASSLLSHLPTGHVVHALVEKLGFQSDLFLQNTLLHMYTRCCGSV--AHHF 989
            DTFTCSFVLKA   LS +  G  +H L +KLGF S+LFLQN +L++Y   CG +  A   
Sbjct: 9    DTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYG-LCGEMGDAMLL 67

Query: 988  FDKMPQRDVVSWNIMTTHLTKQPDGILSAHALFDQMPKRSVRSWTAMIAGYVQCGKPKEA 809
            F+KMPQRD V+WNI+   L K+ D I  A+  F +MP ++VRSWT+MI+G+VQCGKP EA
Sbjct: 68   FEKMPQRDAVTWNIVIAQLAKRGD-IDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEA 126

Query: 808  IRLFTQMEEAGGKPNEXXXXXXXXXXXXXXXXXXGMRVHDYLNKCGFGRNVRVRNTLIDM 629
            I LF ++E+   +PNE                  G  VH+Y  K GF RNV V NTLIDM
Sbjct: 127  IDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDM 186

Query: 628  YIKCGCFKIARKVFDEMEERTVVSWSTMIGGHAIHGQGEEALKLFSKMLRIGIRPNGITF 449
            Y+KCGC + AR+VF EMEERTVVSWS MI G A+HGQ EEAL LFS+M+++G++PNG+TF
Sbjct: 187  YVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTF 246

Query: 448  IGLLHACSHMGLIDEGRRFFSCMTRDYGIIPQIEHYGCMVDLLSRSGLLQEAYEFINNMP 269
            IGLLHACSHMGLIDEGRRFF+ MT DYG+IPQIEHYGC+VDL SR+GLL+EA+EFI +MP
Sbjct: 247  IGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP 306

Query: 268  VKPNGVVWGALLGGCKLHKNVELAEEAIRHLLVLDPLNDGYYVVLSNIYADAERWEDTAR 89
            +KPNGVVWGALLGGCK+HKN++LAEEAI+HL  LDPLNDGYYVV+SNIYA+AERWED AR
Sbjct: 307  IKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAAR 366

Query: 88   VRKLMKDQGVKKTPGRSSILADGVVHEFV 2
            VRKLMKD+GVKKT G SSI  +GVVHEFV
Sbjct: 367  VRKLMKDRGVKKTSGWSSITVNGVVHEFV 395


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 617

 Score =  509 bits (1311), Expect = e-142
 Identities = 244/388 (62%), Positives = 300/388 (77%), Gaps = 1/388 (0%)
 Frame = -2

Query: 1162 DTFTCSFVLKASSLLSHLPTGHVVHALVEKLGFQSDLFLQNTLLHMYTRCCG-SVAHHFF 986
            D +TCSFVLKA S L  +  G +VH  VEKLG QS++FLQN ++H+Y  C    VA   F
Sbjct: 112  DHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVF 171

Query: 985  DKMPQRDVVSWNIMTTHLTKQPDGILSAHALFDQMPKRSVRSWTAMIAGYVQCGKPKEAI 806
            DKMPQRDV++WNIM   L K  D    A+ LF +MP+R+VRSWT+MI GY QCGK KEAI
Sbjct: 172  DKMPQRDVITWNIMIARLVKMGDAE-GAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAI 230

Query: 805  RLFTQMEEAGGKPNEXXXXXXXXXXXXXXXXXXGMRVHDYLNKCGFGRNVRVRNTLIDMY 626
             LF +ME+AG  PNE                  G R+HD+ N+ G+ +N+RV NTLIDMY
Sbjct: 231  DLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMY 290

Query: 625  IKCGCFKIARKVFDEMEERTVVSWSTMIGGHAIHGQGEEALKLFSKMLRIGIRPNGITFI 446
            +KCGC + A ++FD MEERTVVSWS MI G A HG+ E+AL LF+KM+  G++PN +TFI
Sbjct: 291  VKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFI 350

Query: 445  GLLHACSHMGLIDEGRRFFSCMTRDYGIIPQIEHYGCMVDLLSRSGLLQEAYEFINNMPV 266
            G+LHACSHMG++++GR++F+ MTRDYGI+P+IEHYGCMVDL SR+GLLQEA+EFI NMP+
Sbjct: 351  GILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPI 410

Query: 265  KPNGVVWGALLGGCKLHKNVELAEEAIRHLLVLDPLNDGYYVVLSNIYADAERWEDTARV 86
             PNGVVWGALLGGCK+HKN++LAEEA RHL  LDPLNDGYYVVLSNIYA+A RWED ARV
Sbjct: 411  APNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARV 470

Query: 85   RKLMKDQGVKKTPGRSSILADGVVHEFV 2
            RKLM+D+GVKKTPG SSI+ +GVV+ FV
Sbjct: 471  RKLMRDRGVKKTPGWSSIMVEGVVYNFV 498


>ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 583

 Score =  482 bits (1241), Expect = e-134
 Identities = 231/368 (62%), Positives = 283/368 (76%), Gaps = 1/368 (0%)
 Frame = -2

Query: 1162 DTFTCSFVLKASSLLSHLPTGHVVHALVEKLGFQSDLFLQNTLLHMYTRCCG-SVAHHFF 986
            D +TCSFVLKA S L  +  G +VH  VEKLG QS++FLQN ++H+Y  C    VA   F
Sbjct: 112  DHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVF 171

Query: 985  DKMPQRDVVSWNIMTTHLTKQPDGILSAHALFDQMPKRSVRSWTAMIAGYVQCGKPKEAI 806
            DKMPQRDV++WNIM   L K  D    A+ LF +MP+R+VRSWT+MI GY QCGK KEAI
Sbjct: 172  DKMPQRDVITWNIMIARLVKMGDAE-GAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAI 230

Query: 805  RLFTQMEEAGGKPNEXXXXXXXXXXXXXXXXXXGMRVHDYLNKCGFGRNVRVRNTLIDMY 626
             LF +ME+AG  PNE                  G R+HD+ N+ G+ +N+RV NTLIDMY
Sbjct: 231  DLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMY 290

Query: 625  IKCGCFKIARKVFDEMEERTVVSWSTMIGGHAIHGQGEEALKLFSKMLRIGIRPNGITFI 446
            +KCGC + A ++FD MEERTVVSWS MI G A HG+ E+AL LF+KM+  G++PN +TFI
Sbjct: 291  VKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFI 350

Query: 445  GLLHACSHMGLIDEGRRFFSCMTRDYGIIPQIEHYGCMVDLLSRSGLLQEAYEFINNMPV 266
            G+LHACSHMG++++GR++F+ MTRDYGI+P+IEHYGCMVDL SR+GLLQEA+EFI NMP+
Sbjct: 351  GILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPI 410

Query: 265  KPNGVVWGALLGGCKLHKNVELAEEAIRHLLVLDPLNDGYYVVLSNIYADAERWEDTARV 86
             PNGVVWGALLGGCK+HKNV+LAEEA RHL  LDPLNDGYYVVLSNIYA+A RWED ARV
Sbjct: 411  APNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARV 470

Query: 85   RKLMKDQG 62
            RKLM+D+G
Sbjct: 471  RKLMRDRG 478