BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031462
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   194   2e-47
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]   172   6e-41
emb|CBI38228.3| unnamed protein product [Vitis vinifera]              171   1e-40
dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]    168   1e-39
ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g...   165   8e-39

>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score =  194 bits (492), Expect = 2e-47
 Identities = 122/268 (45%), Positives = 163/268 (60%), Gaps = 28/268 (10%)
 Frame = -3

Query: 721 DSGAKIRV-SVERCPPCALETDELIQIRGDSLAVKKAVLAVSQSLQESLVLD-----GSK 560
           +SG+KI+V + E+ P CA  TDE+++I GD LAVKKA++AVS+ LQ+   +D     G +
Sbjct: 179 ESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGR 238

Query: 559 PFVAAPNGAFADPYAGPHQT--SFLPPRVNSSVDY--GSRSYSMPAE-----------EE 425
           P    P  +  DP     Q   S LPP  ++++ Y  GSR  S+  E           +E
Sbjct: 239 PLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQE 298

Query: 424 VVFRLLCSNDRXXXXXXXXXXXXKALQDETGASISIAAPVAESDERVIHISAMENVESQH 245
           V+F++LCSNDR            KALQ+E GASIS+ APVAE DER+I I+A EN ES++
Sbjct: 299 VIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRY 358

Query: 244 SPAQNAVIRVFTKS------SGYTRLESGVNAEARLLVPFDQIGRVVGKGGTTISEMRRA 83
           SPAQN VI VF +S       G      G    ARL+VP +Q+G ++GKGGT ISEMR+A
Sbjct: 359 SPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKA 418

Query: 82  SRTSM-WVSYDQVPPCAAENDTVVQING 2
           S   +  +  DQVP CA+END VVQI+G
Sbjct: 419 SGAGIRIIGSDQVPKCASENDQVVQISG 446



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
 Frame = -3

Query: 424 VVFRLLCSNDRXXXXXXXXXXXXKALQDETGASISIAAPVAESDERVIHISAMENV---- 257
           V FRLLC   R            K LQ +TGA I +    + SD RVI + A  +V    
Sbjct: 51  VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110

Query: 256 -------ESQHSPAQNAVIRVFTKSSGYTRLESGVN----AEARLLVPFDQIGRVVGKGG 110
                  E + S AQ AV+RVF +      +  GV        RLL    Q+G V+GKGG
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKGG 170

Query: 109 TTISEMRRASRTSMWV-SYDQVPPCAAENDTVVQING 2
             + ++RR S + + V + +++P CAA  D +V+I G
Sbjct: 171 KVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEG 207


>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
          Length = 569

 Score =  172 bits (436), Expect = 6e-41
 Identities = 111/245 (45%), Positives = 146/245 (59%), Gaps = 27/245 (11%)
 Frame = -3

Query: 655 LIQIRGDSLAVKKAVLAVSQSLQESLVLD-----GSKPFVAAPNGAFADPYAGPHQT--S 497
           ++QI GD LAVKKA++AVS+ LQ+   +D     G +P    P  +  DP     Q   S
Sbjct: 123 VLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGS 182

Query: 496 FLPPRVNSSVDY--GSRSYSMPAE-----------EEVVFRLLCSNDRXXXXXXXXXXXX 356
            LPP  ++++ Y  GSR  S+  E           +EV+F++LCSNDR            
Sbjct: 183 VLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIV 242

Query: 355 KALQDETGASISIAAPVAESDERVIHISAMENVESQHSPAQNAVIRVFTKS------SGY 194
           KALQ+E GASIS+ APVAE DER+I I+A EN ES++SPAQN VI VF +S       G 
Sbjct: 243 KALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGL 302

Query: 193 TRLESGVNAEARLLVPFDQIGRVVGKGGTTISEMRRASRTSM-WVSYDQVPPCAAENDTV 17
                G    ARL+VP +Q+G ++GKGGT ISEMR+AS   +  +  DQVP CA+END V
Sbjct: 303 DSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQV 362

Query: 16  VQING 2
           VQI+G
Sbjct: 363 VQISG 367


>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  171 bits (433), Expect = 1e-40
 Identities = 115/264 (43%), Positives = 152/264 (57%), Gaps = 27/264 (10%)
 Frame = -3

Query: 712 AKIRVSVERCPPCALETDELIQIRGDSLAVKKAVLAVSQSLQESLVLD-----GSKPFVA 548
           +K +  + RC      T  +I I GD LAVKKA++AVS+ LQ+   +D     G +P   
Sbjct: 120 SKEKFCIIRCEIKRKITLIMIIIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEV 179

Query: 547 APNGAFADPYAGPHQT--SFLPPRVNSSVDY--GSRSYSMPAE-----------EEVVFR 413
            P  +  DP     Q   S LPP  ++++ Y  GSR  S+  E           +EV+F+
Sbjct: 180 VPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFK 239

Query: 412 LLCSNDRXXXXXXXXXXXXKALQDETGASISIAAPVAESDERVIHISAMENVESQHSPAQ 233
           +LCSNDR            KALQ+E GASIS+ APVAE DER+I I+A EN ES++SPAQ
Sbjct: 240 ILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQ 299

Query: 232 NAVIRVFTKS------SGYTRLESGVNAEARLLVPFDQIGRVVGKGGTTISEMRRASRTS 71
           N VI VF +S       G      G    ARL+VP +Q+G ++GKGGT ISEMR+AS   
Sbjct: 300 NGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAG 359

Query: 70  M-WVSYDQVPPCAAENDTVVQING 2
           +  +  DQVP CA+END VVQI+G
Sbjct: 360 IRIIGSDQVPKCASENDQVVQISG 383


>dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 627

 Score =  168 bits (425), Expect = 1e-39
 Identities = 107/258 (41%), Positives = 152/258 (58%), Gaps = 18/258 (6%)
 Frame = -3

Query: 721 DSGAKIRV--SVERCPPCALETDELIQIRGDSLAVKKAVLAVSQSLQESLVLDGS----- 563
           +SGA+IRV  + E+ PPCAL+ DELI I G   A +KA+L VS  LQ++   D S     
Sbjct: 138 ESGAQIRVFRNREQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPRPDTSNFPSG 197

Query: 562 KPFVAAPNGAFADPYAGPH-QTSFLPPRVNSSVDYGSRSYSMPA---------EEEVVFR 413
           +PF    +G    P   PH Q S+LPP      DY +R++S            E+E+VFR
Sbjct: 198 RPFGPPGSGVGCPPGVDPHSQRSYLPPP--HVPDYHARNFSSNGAAPGPRFFVEQEIVFR 255

Query: 412 LLCSNDRXXXXXXXXXXXXKALQDETGASISIAAPVAESDERVIHISAMENVESQHSPAQ 233
           ++C ND             +ALQ ETGAS+ +  PVA+SDER+I ISA EN E   SP+Q
Sbjct: 256 MICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQ 315

Query: 232 NAVIRVFTKSSGYTRLESGVNAEARLLVPFDQIGRVVGKGGTTISEMRRASRTSMWV-SY 56
           +A++RV++K S    ++   +  ARLLVP   IG ++GKGG+ I+EMR+ +  S+ +   
Sbjct: 316 DALLRVYSKIS-EASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGN 374

Query: 55  DQVPPCAAENDTVVQING 2
           +Q+P CA  ND +VQ+ G
Sbjct: 375 EQIPRCAQRNDELVQVTG 392


>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 710

 Score =  165 bits (418), Expect = 8e-39
 Identities = 116/298 (38%), Positives = 163/298 (54%), Gaps = 58/298 (19%)
 Frame = -3

Query: 721  DSGAKIRVSVERCPPCALETDELIQIRGDSLAVKKAVLAVSQSLQESLVLD-----GSKP 557
            ++G KIRV  +  P CA  +DE+I+I G   +VKKA++AVSQ LQ+   +D     GSKP
Sbjct: 173  ETGCKIRVLTDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQDCHPVDRTKMMGSKP 232

Query: 556  F------------------------VAAPNGAFADPYAGPHQT--------SFLPPRVNS 473
            +                         AAP G      A  H+T        S L    +S
Sbjct: 233  YEIVQYEALDALPRATSTAAPRVTLTAAPRGTLT---AVQHETVDHLLLRSSALSTLSSS 289

Query: 472  SVDYGSRSYSMPAE-------------EEVVFRLLCSNDRXXXXXXXXXXXXKALQDETG 332
            S  Y +R +S+P E             +EV FR+LCSNDR            +ALQ ETG
Sbjct: 290  SNSYATRIHSLPTEVNRVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETG 349

Query: 331  ASISIAAPVAESDERVIHISAMENVESQHSPAQNAVIRVFTKS--SGYTR-LESGVN--- 170
            A+ISI   VAE ++R+I I+A EN ES++SPAQ A + VF++S   G+ + L+SG+N   
Sbjct: 350  ATISIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGS 409

Query: 169  -AEARLLVPFDQIGRVVGKGGTTISEMRRASRTSM-WVSYDQVPPCAAENDTVVQING 2
                RL+VP  Q+G ++GKGG  +SEMR+A+  ++  +  DQVP CA++ND VVQI+G
Sbjct: 410  IVTVRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISG 467



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
 Frame = -3

Query: 424 VVFRLLCSNDRXXXXXXXXXXXXKALQDETGASISIAAPVAESDERVIHISA-------- 269
           V FRLLC+  R            K LQ  TGA I I     E  +R+I + A        
Sbjct: 45  VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104

Query: 268 -MENVES-QHSPAQNAVIRVFTK----SSGYTRLESGVNA-EARLLVPFDQIGRVVGKGG 110
            + N E  + S AQ A+++VF +      G   ++ G      RL+    Q G V+GKGG
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRVMSCRLVADAAQAGSVIGKGG 164

Query: 109 TTISEMRRASRTSMWVSYDQVPPCAAENDTVVQING 2
             +  +++ +   + V  D +P CA+ +D +++I G
Sbjct: 165 KVVERIKKETGCKIRVLTDDLPLCASASDEIIEIEG 200