BLASTX nr result

ID: Cimicifuga21_contig00031378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031378
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002512727.1| protein with unknown function [Ricinus commu...    73   2e-11
ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
emb|CAN78116.1| hypothetical protein VITISV_001341 [Vitis vinifera]    67   1e-09
ref|XP_004135876.1| PREDICTED: putative receptor-like protein ki...    66   3e-09

>ref|XP_002303855.1| predicted protein [Populus trichocarpa] gi|222841287|gb|EEE78834.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = -1

Query: 230 QDGTGELRSKDYVTEWIGSQICPSRNPDWDEVSRNSPLKTHLDHSSHLDKLELRNASQP 54
           QDG+GEL SKDYV EWIGSQICPS NPDW++  +++P +T +  S  LDK  L +A++P
Sbjct: 385 QDGSGELCSKDYVMEWIGSQICPSTNPDWEDEKKSTPERTEMRRSVALDK--LADANEP 441


>ref|XP_002512727.1| protein with unknown function [Ricinus communis]
           gi|223547738|gb|EEF49230.1| protein with unknown
           function [Ricinus communis]
          Length = 532

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/56 (62%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
 Frame = -1

Query: 230 QDGTGELRSKDYVTEWIGSQICPSRNPDWDEVSRNSPLKTHLDHS--SHLDKLELR 69
           QDG+GEL SKDYV EWIGSQICPS NPDWDE  +N+P +  L  +  S  DK E R
Sbjct: 222 QDGSGELCSKDYVMEWIGSQICPSTNPDWDEEKKNTPERRELQDAIESQFDKKESR 277


>ref|XP_002332071.1| predicted protein [Populus trichocarpa] gi|222831957|gb|EEE70434.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = -1

Query: 230 QDGTGELRSKDYVTEWIGSQICPSRNPDWDEVSRNSPLKTHLDHSSHLDKLELRNASQP 54
           QDG+GEL SKDYV EWIGSQ CPS N DWD+  R++P +  L     LDKL+  +A++P
Sbjct: 124 QDGSGELCSKDYVMEWIGSQDCPSANLDWDDEKRSTPGRKELRRMVPLDKLD--DANEP 180


>emb|CAN78116.1| hypothetical protein VITISV_001341 [Vitis vinifera]
          Length = 398

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = -1

Query: 230 QDGTGELRSKDYVTEWIGSQICPSRNPDWDEVSRNSPLKTHL-DHSSHLDKLELRNASQP 54
           QDG+GEL SKDYV EWIGSQICPS NPDW+E  + SP  +     +S+LD       SQ 
Sbjct: 55  QDGSGELCSKDYVMEWIGSQICPSANPDWEEEKKCSPSPSPAKPQNSNLDSSIRLEESQL 114

Query: 53  GE 48
           GE
Sbjct: 115 GE 116


>ref|XP_004135876.1| PREDICTED: putative receptor-like protein kinase At1g80870-like
           [Cucumis sativus] gi|449509150|ref|XP_004163509.1|
           PREDICTED: putative receptor-like protein kinase
           At1g80870-like [Cucumis sativus]
          Length = 720

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -1

Query: 230 QDGTGELRSKDYVTEWIGSQICPSRNPDWDEVSRNSPLKTHLDHSSHLDKLE 75
           QDG+GEL SKDYV EWIGSQI P+ NPDWDE ++ +P K + + S  L+ ++
Sbjct: 381 QDGSGELCSKDYVMEWIGSQIYPTANPDWDEETKTTPEKANCNCSFPLENMD 432


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