BLASTX nr result

ID: Cimicifuga21_contig00031376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031376
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40273.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002285338.1| PREDICTED: probably inactive leucine-rich re...   123   2e-26
ref|XP_002298744.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002313141.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002518690.1| serine-threonine protein kinase, plant-type,...   115   4e-24

>emb|CBI40273.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/106 (53%), Positives = 72/106 (67%)
 Frame = +3

Query: 3   LGFNKIEGYLPENLAMYTSLSSLTLRNNKFQGPIPWQYSKKVSLRRLFLDGNFLNGKVPP 182
           LGFN+I+GY+P N + +  LSSL+LR N+ +GPIP  YSKK +L+RLFLDGNFLNGK P 
Sbjct: 271 LGFNQIKGYVPTNFSAFPLLSSLSLRYNQLRGPIPLDYSKKETLKRLFLDGNFLNGKAPV 330

Query: 183 XXXXXXXXXXXXXXXXCLESCPVSLELCAPSQKPSSVCKHVYGRRP 320
                           CL+SCP S +LC PSQKP+S+CK  YG +P
Sbjct: 331 GFFSGWSGVSGSLGDNCLQSCPTSSQLCLPSQKPNSICKQAYGGKP 376


>ref|XP_002285338.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At3g28040-like [Vitis vinifera]
          Length = 378

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/106 (53%), Positives = 72/106 (67%)
 Frame = +3

Query: 3   LGFNKIEGYLPENLAMYTSLSSLTLRNNKFQGPIPWQYSKKVSLRRLFLDGNFLNGKVPP 182
           LGFN+I+GY+P N + +  LSSL+LR N+ +GPIP  YSKK +L+RLFLDGNFLNGK P 
Sbjct: 271 LGFNQIKGYVPTNFSAFPLLSSLSLRYNQLRGPIPLDYSKKETLKRLFLDGNFLNGKAPV 330

Query: 183 XXXXXXXXXXXXXXXXCLESCPVSLELCAPSQKPSSVCKHVYGRRP 320
                           CL+SCP S +LC PSQKP+S+CK  YG +P
Sbjct: 331 GFFSGWSGVSGSLGDNCLQSCPTSSQLCLPSQKPNSICKQAYGGKP 376


>ref|XP_002298744.1| predicted protein [Populus trichocarpa] gi|222846002|gb|EEE83549.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/106 (55%), Positives = 70/106 (66%)
 Frame = +3

Query: 3   LGFNKIEGYLPENLAMYTSLSSLTLRNNKFQGPIPWQYSKKVSLRRLFLDGNFLNGKVPP 182
           LGFNKIEG  P + A Y  LSSL+LR N+ +G IP +YS+K SLRRLFLDGNFL GK PP
Sbjct: 280 LGFNKIEGNAPLHFADYPLLSSLSLRYNRLRGTIPLEYSRKKSLRRLFLDGNFLIGKPPP 339

Query: 183 XXXXXXXXXXXXXXXXCLESCPVSLELCAPSQKPSSVCKHVYGRRP 320
                           CL++CP S +LC P+QKPSSVCK  YG +P
Sbjct: 340 AFFAADTSVSGSLGDNCLQACPGSFQLCMPTQKPSSVCKQAYGGKP 385


>ref|XP_002313141.1| predicted protein [Populus trichocarpa] gi|222849549|gb|EEE87096.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/106 (55%), Positives = 69/106 (65%)
 Frame = +3

Query: 3   LGFNKIEGYLPENLAMYTSLSSLTLRNNKFQGPIPWQYSKKVSLRRLFLDGNFLNGKVPP 182
           LGFNKIEG  P + A Y  LSSL+LR N  +G IP +YS+K SLRRLFLDGNFL GK PP
Sbjct: 278 LGFNKIEGNAPLHFADYPLLSSLSLRYNSLRGTIPLEYSRKKSLRRLFLDGNFLIGKPPP 337

Query: 183 XXXXXXXXXXXXXXXXCLESCPVSLELCAPSQKPSSVCKHVYGRRP 320
                           CL++CP S +LC PSQKPSS+CK  YG +P
Sbjct: 338 AFFAADTSVSGSIGDNCLQACPGSSQLCMPSQKPSSICKQAYGGKP 383


>ref|XP_002518690.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223542071|gb|EEF43615.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 386

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/105 (55%), Positives = 69/105 (65%)
 Frame = +3

Query: 3   LGFNKIEGYLPENLAMYTSLSSLTLRNNKFQGPIPWQYSKKVSLRRLFLDGNFLNGKVPP 182
           LGFNKIEG +P N A Y  LSSL+LR N+ +G IP ++S+K SL+RLFLDGNFL GK P 
Sbjct: 277 LGFNKIEGNVPLNFADYPLLSSLSLRYNRLRGTIPLEFSQKKSLKRLFLDGNFLIGKPPS 336

Query: 183 XXXXXXXXXXXXXXXXCLESCPVSLELCAPSQKPSSVCKHVYGRR 317
                           CL+ CP S +LC PSQKPSSVCK  YGR+
Sbjct: 337 EFFAGGVPVTGSLGDNCLQGCPGSSQLCTPSQKPSSVCKQAYGRK 381


Top