BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031327
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509474.1| Transcription regulatory protein SWI3, putat...   157   3e-36
ref|XP_002305423.1| chromatin remodeling complex subunit [Populu...   147   3e-33
ref|XP_004163209.1| PREDICTED: uncharacterized protein LOC101232...   141   2e-31
ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...   141   2e-31
ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago tr...   141   2e-31

>ref|XP_002509474.1| Transcription regulatory protein SWI3, putative [Ricinus communis]
            gi|223549373|gb|EEF50861.1| Transcription regulatory
            protein SWI3, putative [Ricinus communis]
          Length = 983

 Score =  157 bits (398), Expect = 3e-36
 Identities = 77/142 (54%), Positives = 104/142 (73%)
 Frame = +1

Query: 52   KSEKTSNLSETRDDHNVDKVKRXXXXXXXXXXXXXXXXXDQEENQIRQLSTFLIEKQLHK 231
            K EK  + +E +DDHN+DK+K                  +QEE+QIRQL+  LIEKQLHK
Sbjct: 805  KKEKPDS-NEIKDDHNIDKIKSAAISALSAAAVKAKLLANQEEDQIRQLAASLIEKQLHK 863

Query: 232  IETKLGFFTDMENVIMKAKDQMDRSRQRLFQERAQIIADRLGIPASSSRAMPPSLPSNRV 411
            +ETKL FF +M+++IM+ ++Q+D+SRQRL+ ERAQIIA RLGIP SSSRAMPP+LP+NR+
Sbjct: 864  LETKLSFFNEMDHIIMRVREQLDKSRQRLYHERAQIIATRLGIPPSSSRAMPPTLPTNRI 923

Query: 412  ASSYANSVPKSLPNMNPQKAPV 477
            A + ANS+P+   NMN Q+ P+
Sbjct: 924  AMNIANSIPRPPVNMNSQRPPI 945


>ref|XP_002305423.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222848387|gb|EEE85934.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1005

 Score =  147 bits (372), Expect = 3e-33
 Identities = 80/161 (49%), Positives = 110/161 (68%)
 Frame = +1

Query: 1    IDTGAIAGECDLKIIECKSEKTSNLSETRDDHNVDKVKRXXXXXXXXXXXXXXXXXDQEE 180
            +++GA A E      + K EK  +    +DD+N+DK+KR                 +QEE
Sbjct: 812  VESGATADEVPK---DSKKEKPDS-EVIKDDNNIDKLKRAAVSALSAAAVKAKLLANQEE 867

Query: 181  NQIRQLSTFLIEKQLHKIETKLGFFTDMENVIMKAKDQMDRSRQRLFQERAQIIADRLGI 360
            +QIR+L+  LIEKQLHK+ETKL FF +M++VIM+ ++Q+DRSRQRL+QERAQIIA RLG+
Sbjct: 868  DQIRELAASLIEKQLHKLETKLAFFNEMDSVIMRVREQLDRSRQRLYQERAQIIAARLGL 927

Query: 361  PASSSRAMPPSLPSNRVASSYANSVPKSLPNMNPQKAPVKT 483
            P  SSRAMP SLPSNR+A ++AN+ P+   NM  Q+ P+ T
Sbjct: 928  P-PSSRAMPQSLPSNRIAMNFANTFPRPPMNMATQRPPIST 967


>ref|XP_004163209.1| PREDICTED: uncharacterized protein LOC101232377 [Cucumis sativus]
          Length = 393

 Score =  141 bits (356), Expect = 2e-31
 Identities = 70/145 (48%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = +1

Query: 46  ECKSEKTSNLSET-RDDHNVDKVKRXXXXXXXXXXXXXXXXXDQEENQIRQLSTFLIEKQ 222
           + K  K  N + T + +  +DK+KR                 +QEE+QIRQL+  LIEKQ
Sbjct: 208 QSKDNKEENSNSTGKKEEKIDKLKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILIEKQ 267

Query: 223 LHKIETKLGFFTDMENVIMKAKDQMDRSRQRLFQERAQIIADRLGIPASSSRAMPPSLPS 402
           LHK+E+KL FF +M+NV ++ ++Q+DRS+QRLFQERAQIIA RLG+PASSSR + P+LP+
Sbjct: 268 LHKLESKLAFFNEMDNVTLRVREQLDRSKQRLFQERAQIIAARLGLPASSSRGVAPTLPA 327

Query: 403 NRVASSYANSVPKSLPNMNPQKAPV 477
           NR+A ++ NS P+    M PQ+ P+
Sbjct: 328 NRMAMNFPNSAPRPPMGMTPQRPPI 352


>ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Cucumis sativus]
          Length = 1024

 Score =  141 bits (356), Expect = 2e-31
 Identities = 70/145 (48%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = +1

Query: 46   ECKSEKTSNLSET-RDDHNVDKVKRXXXXXXXXXXXXXXXXXDQEENQIRQLSTFLIEKQ 222
            + K  K  N + T + +  +DK+KR                 +QEE+QIRQL+  LIEKQ
Sbjct: 839  QSKDNKEENSNSTGKKEEKIDKLKRAAVTTLSAAAVKAKILANQEEDQIRQLAMILIEKQ 898

Query: 223  LHKIETKLGFFTDMENVIMKAKDQMDRSRQRLFQERAQIIADRLGIPASSSRAMPPSLPS 402
            LHK+E+KL FF +M+NV ++ ++Q+DRS+QRLFQERAQIIA RLG+PASSSR + P+LP+
Sbjct: 899  LHKLESKLAFFNEMDNVTLRVREQLDRSKQRLFQERAQIIAARLGLPASSSRGVAPTLPA 958

Query: 403  NRVASSYANSVPKSLPNMNPQKAPV 477
            NR+A ++ NS P+    M PQ+ P+
Sbjct: 959  NRMAMNFPNSAPRPPMGMTPQRPPI 983


>ref|XP_003606885.1| SWI/SNF complex subunit SMARCC1 [Medicago truncatula]
            gi|355507940|gb|AES89082.1| SWI/SNF complex subunit
            SMARCC1 [Medicago truncatula]
          Length = 1041

 Score =  141 bits (356), Expect = 2e-31
 Identities = 74/157 (47%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
 Frame = +1

Query: 4    DTGAIAG---ECDLKIIECKSEKTSNLSETRDDHNVDKVKRXXXXXXXXXXXXXXXXXDQ 174
            + GAIAG   +C    +E K++     S+T+ D + +KVKR                 +Q
Sbjct: 846  ENGAIAGAVEDCAGNGMEVKNDG----SKTKQDSSFEKVKRAAVSTLAAAAVKAKVLANQ 901

Query: 175  EENQIRQLSTFLIEKQLHKIETKLGFFTDMENVIMKAKDQMDRSRQRLFQERAQIIADRL 354
            EE+QIR+L++ LIEKQLHK+ETKL FF DME+++M+ K+ +DRSR +L+ ERA II+ RL
Sbjct: 902  EEDQIRELTSALIEKQLHKLETKLAFFNDMEHLVMRVKELLDRSRHKLYHERAMIISSRL 961

Query: 355  GIPASSSRAMPPSLPSNRVASSYANSVPKSLPNMNPQ 465
            G+PASSSR +PPS+P+NR+  ++ANS+ +   NMNPQ
Sbjct: 962  GVPASSSRGVPPSIPTNRIPMNFANSLQRPQFNMNPQ 998