BLASTX nr result

ID: Cimicifuga21_contig00031301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031301
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34712.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis ...   116   2e-24
gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]       104   7e-21
ref|XP_002299559.1| GRAS family transcription factor [Populus tr...   100   9e-20
ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus commun...    94   9e-18

>emb|CBI34712.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 MLAGGSTLLSPRHRLRSEASNQLKACHFQLPSMSTQRLDFPCNFPRKDATRSQIIRPVGL 48
           MLAG STLLSPRHRLRSE S Q +ACHFQLPSMSTQRLD PC+FPRKDA+RSQ IRPVGL
Sbjct: 1   MLAGCSTLLSPRHRLRSETSAQFQACHFQLPSMSTQRLDLPCSFPRKDASRSQPIRPVGL 60

Query: 47  SVEVPNEAKGS-CSIR 3
           SVE   EAK S CS++
Sbjct: 61  SVEKSMEAKTSTCSLK 76


>ref|XP_002276880.1| PREDICTED: scarecrow-like protein 28 [Vitis vinifera]
          Length = 676

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = -1

Query: 227 MLAGGSTLLSPRHRLRSEASNQLKACHFQLPSMSTQRLDFPCNFPRKDATRSQIIRPVGL 48
           MLAG STLLSPRHRLRSE S Q +ACHFQLPSMSTQRLD PC+FPRKDA+RSQ IRPVGL
Sbjct: 1   MLAGCSTLLSPRHRLRSETSAQFQACHFQLPSMSTQRLDLPCSFPRKDASRSQPIRPVGL 60

Query: 47  SVEVPNEAKGS-CSIR 3
           SVE   EAK S CS++
Sbjct: 61  SVEKSMEAKTSTCSLK 76


>gb|AFH54533.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 503

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/78 (71%), Positives = 63/78 (80%), Gaps = 3/78 (3%)
 Frame = -1

Query: 227 MLAG--GSTLLSPRHRLRSEASNQLKACHFQLPSMSTQRLDFPCNFPRKDATRSQIIRPV 54
           MLAG   STLLSPRHRLRSEA  Q +ACHFQLPSMSTQRLD PC+F RK+++RSQ IRPV
Sbjct: 1   MLAGCSSSTLLSPRHRLRSEAPAQFQACHFQLPSMSTQRLDLPCSFSRKESSRSQPIRPV 60

Query: 53  GLSVEVPNEAK-GSCSIR 3
           GLSVE   E K  SCS++
Sbjct: 61  GLSVEKAIEPKTSSCSLK 78


>ref|XP_002299559.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846817|gb|EEE84364.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 666

 Score =  100 bits (250), Expect = 9e-20
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 5/80 (6%)
 Frame = -1

Query: 227 MLAG--GSTLLSPRHRLRSEASNQLKACHFQLPSMSTQRLDFPCNFPRKDATRSQIIRP- 57
           MLAG   STLLSPRHRLRSE+  Q +ACHFQLPSMSTQRLD PC F RK+++RSQ IRP 
Sbjct: 1   MLAGCSSSTLLSPRHRLRSESPAQFQACHFQLPSMSTQRLDLPCTFSRKESSRSQPIRPV 60

Query: 56  -VGLSVEVPNEAK-GSCSIR 3
            VGLSV+ P E+K  SCS++
Sbjct: 61  GVGLSVDKPLESKTSSCSLK 80


>ref|XP_002509714.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223549613|gb|EEF51101.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 662

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 5/80 (6%)
 Frame = -1

Query: 227 MLAG--GSTLLSPRHRLRSEASNQLKACHFQLPSMSTQRLDFPCNFPRKDATRSQIIRP- 57
           MLAG   S+LLSPRHRLRSE+  Q +ACHFQLPSMSTQRLD PC F RK+++RSQ IRP 
Sbjct: 1   MLAGCSSSSLLSPRHRLRSESPAQFQACHFQLPSMSTQRLDLPCTFSRKESSRSQPIRPV 60

Query: 56  -VGLSVEVPNEAK-GSCSIR 3
            VGLSV+   E+K  +CS++
Sbjct: 61  GVGLSVDKSLESKTTTCSLK 80


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