BLASTX nr result

ID: Cimicifuga21_contig00031239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031239
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269394.1| PREDICTED: uncharacterized protein LOC100266...   103   2e-20
ref|XP_002316812.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002522240.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
emb|CBI22018.3| unnamed protein product [Vitis vinifera]               94   9e-18
gb|AFK43794.1| unknown [Lotus japonicus]                               94   1e-17

>ref|XP_002269394.1| PREDICTED: uncharacterized protein LOC100266883 [Vitis vinifera]
          Length = 230

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/84 (64%), Positives = 69/84 (82%), Gaps = 2/84 (2%)
 Frame = +1

Query: 1   NSSLVSIIPGLQRLGKEDQQEEK--ETNLVSRPYLSEAWEVMNEREEMEKHPFMMRMNWR 174
           +SSLVSIIPGL RLGK+D +EEK  + + V RPYLSEAWEV++ R++  ++P M   NWR
Sbjct: 150 DSSLVSIIPGLHRLGKKDGEEEKTVDESAVPRPYLSEAWEVLDRRKK--ENPLM---NWR 204

Query: 175 FPSLSNEIDMKDHLRSWAHTVATS 246
            P+LS+EIDMKD+LRSWAHTVA+S
Sbjct: 205 VPALSSEIDMKDNLRSWAHTVASS 228


>ref|XP_002316812.1| predicted protein [Populus trichocarpa] gi|222859877|gb|EEE97424.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   NSSLVSIIPGLQRLGKEDQQEEK-ETNLVSRPYLSEAWEVMNEREEMEKHPFMMRMNWRF 177
           +S+L SIIPGLQRLGK+ + E   +   VSRPYLSEAWEV  +R  M++ P M   NW  
Sbjct: 155 DSNLASIIPGLQRLGKQHEDETVLDEPTVSRPYLSEAWEVQEQR--MKEEPLM---NWAI 209

Query: 178 PSLSNEIDMKDHLRSWAHTVATSAV 252
           P+LSNEIDMKD+LR WAHTVA++A+
Sbjct: 210 PALSNEIDMKDNLRWWAHTVASAAI 234


>ref|XP_002522240.1| conserved hypothetical protein [Ricinus communis]
           gi|223538493|gb|EEF40098.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 292

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
 Frame = +1

Query: 1   NSSLVSIIPGLQRLGKEDQQEEK--------ETNLVSRPYLSEAWEVMNEREEMEKHPFM 156
           +SSLVSIIPGLQRLG +DQ+EEK        +   VSRPYLSEAWE ++ R++ E     
Sbjct: 206 DSSLVSIIPGLQRLGNKDQEEEKKEEKNSAFDEGAVSRPYLSEAWEALDNRKKEEP---- 261

Query: 157 MRMNWRFPSLSNEIDMKDHLRSWAHTVATS 246
             MNWR P+ +NEIDMK +L+ WAHTVA++
Sbjct: 262 -LMNWRIPASTNEIDMKYNLKWWAHTVAST 290


>emb|CBI22018.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/87 (60%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1   NSSLVSIIPGLQRLGKEDQQEEK-ETNLVSRPYLSEAWEVMNER-EEMEKHPFMMRMNWR 174
           NS LVSI+PGLQRLGK+ +  E  E + VSRPYLSEAW V++ R +EM+       +NWR
Sbjct: 66  NSKLVSIVPGLQRLGKKGEDGENIEKSEVSRPYLSEAWGVLDRRRKEMDG-----LLNWR 120

Query: 175 FPSLSNEIDMKDHLRSWAHTVATSAVR 255
            P+ +NE+DMKDHLR WAHTVA SAVR
Sbjct: 121 IPASANEMDMKDHLRLWAHTVA-SAVR 146


>gb|AFK43794.1| unknown [Lotus japonicus]
          Length = 248

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 7/89 (7%)
 Frame = +1

Query: 1   NSSLVSIIPGLQRLGK-------EDQQEEKETNLVSRPYLSEAWEVMNEREEMEKHPFMM 159
           NSSL SIIPGLQRLGK       E+++E+   +LV RPYLSEAWE   +R++  ++P M 
Sbjct: 163 NSSLASIIPGLQRLGKKEEEQGEEEEEEDSNESLVPRPYLSEAWEFHGKRKK--ENPLM- 219

Query: 160 RMNWRFPSLSNEIDMKDHLRSWAHTVATS 246
             NW+ PSL  EIDMKD LR WAHTVA++
Sbjct: 220 --NWKVPSLKKEIDMKDSLRLWAHTVAST 246


Top