BLASTX nr result

ID: Cimicifuga21_contig00031208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031208
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269806.1| PREDICTED: uncharacterized protein At1g05835...   177   8e-43
ref|XP_002302893.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002515671.1| phd finger protein, putative [Ricinus commun...   162   2e-38
gb|AAF29390.1|AC009999_10 Contains similarity to MLL protein fro...   104   9e-21
ref|NP_001077465.1| PHD finger protein [Arabidopsis thaliana] gi...   104   9e-21

>ref|XP_002269806.1| PREDICTED: uncharacterized protein At1g05835 [Vitis vinifera]
           gi|296089643|emb|CBI39462.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/104 (75%), Positives = 87/104 (83%)
 Frame = -3

Query: 372 HHGWSAKCAADHPTVRQTQVGFGKPPKFLVEVQNNCPMCPVIDVHVKCGSFPQNLVNPRL 193
           H G  AKC+AD PTV QTQVGFG PPKF+VEV NNC MCPVIDVH+KCG+F Q LV+PRL
Sbjct: 20  HQGKGAKCSADGPTVNQTQVGFGNPPKFMVEVHNNCAMCPVIDVHIKCGNFSQALVSPRL 79

Query: 192 FKVLGHDDCVVNSGLPFAPLQKISFNYSHPKFLMSASTWYFQCE 61
           FKVLGHD+CVVN+GLP  PLQK SFNYSH K+ MS S WYFQCE
Sbjct: 80  FKVLGHDNCVVNAGLPLPPLQKFSFNYSHQKYPMSPSIWYFQCE 123


>ref|XP_002302893.1| predicted protein [Populus trichocarpa] gi|222844619|gb|EEE82166.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score =  164 bits (415), Expect = 7e-39
 Identities = 72/102 (70%), Positives = 85/102 (83%)
 Frame = -3

Query: 366 GWSAKCAADHPTVRQTQVGFGKPPKFLVEVQNNCPMCPVIDVHVKCGSFPQNLVNPRLFK 187
           G  AKCA + P+V+QTQVG G PP+F+VEVQNNCPMCPVI++H+KCGSFPQ LVNPRL K
Sbjct: 1   GLGAKCATNAPSVQQTQVGNGNPPRFMVEVQNNCPMCPVINIHLKCGSFPQALVNPRLLK 60

Query: 186 VLGHDDCVVNSGLPFAPLQKISFNYSHPKFLMSASTWYFQCE 61
           V+  DDCVVN GLP +PLQ+ SFNYSH K+LM  S+W FQCE
Sbjct: 61  VVAPDDCVVNGGLPLSPLQRFSFNYSHQKYLMHPSSWSFQCE 102


>ref|XP_002515671.1| phd finger protein, putative [Ricinus communis]
           gi|223545214|gb|EEF46723.1| phd finger protein, putative
           [Ricinus communis]
          Length = 128

 Score =  162 bits (411), Expect = 2e-38
 Identities = 68/104 (65%), Positives = 83/104 (79%)
 Frame = -3

Query: 372 HHGWSAKCAADHPTVRQTQVGFGKPPKFLVEVQNNCPMCPVIDVHVKCGSFPQNLVNPRL 193
           H+G   KC    P ++QTQVG+G PP F+V+V N+CPMCPVI++H+KCGSFPQ LVNPRL
Sbjct: 25  HYGLGTKCETKAPAIQQTQVGYGYPPTFMVQVYNSCPMCPVINIHLKCGSFPQALVNPRL 84

Query: 192 FKVLGHDDCVVNSGLPFAPLQKISFNYSHPKFLMSASTWYFQCE 61
            KVL  DDCV+N GLP APLQK SFNYSH ++L+  +TWYFQCE
Sbjct: 85  LKVLAFDDCVINGGLPLAPLQKFSFNYSHQQYLLHPATWYFQCE 128


>gb|AAF29390.1|AC009999_10 Contains similarity to MLL protein from Fugu rubripes gb|AF036382,
            and contains a PWWP PF|00855 and a SET PF|00856 domain
            [Arabidopsis thaliana]
          Length = 1193

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
 Frame = -3

Query: 345  ADHPTVRQTQVGFGKPPKFLVEVQNNCPMCPVIDVHVKCGSFPQNLVNPRLFKVLGHD-- 172
            +  P VRQTQV + +  KF VEV N CPMCP+I++ +KC  FPQ+LV+P   +VL     
Sbjct: 1096 SSEPAVRQTQVKWREGKKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAG 1155

Query: 171  DCVVNSGLPFAPLQKISFNYSHP-KFLMSASTWYFQCE 61
            +CVVN GLP +P+Q +SFNYS+  +F +   +W FQCE
Sbjct: 1156 NCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQCE 1193


>ref|NP_001077465.1| PHD finger protein [Arabidopsis thaliana]
           gi|257096854|sp|A8MS78.1|Y1583_ARATH RecName:
           Full=Uncharacterized protein At1g05835; Flags: Precursor
           gi|332189781|gb|AEE27902.1| PHD finger protein
           [Arabidopsis thaliana]
          Length = 127

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/98 (50%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
 Frame = -3

Query: 345 ADHPTVRQTQVGFGKPPKFLVEVQNNCPMCPVIDVHVKCGSFPQNLVNPRLFKVLGHD-- 172
           +  P VRQTQV + +  KF VEV N CPMCP+I++ +KC  FPQ+LV+P   +VL     
Sbjct: 30  SSEPAVRQTQVKWREGKKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAG 89

Query: 171 DCVVNSGLPFAPLQKISFNYSHP-KFLMSASTWYFQCE 61
           +CVVN GLP +P+Q +SFNYS+  +F +   +W FQCE
Sbjct: 90  NCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQCE 127


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