BLASTX nr result
ID: Cimicifuga21_contig00031195
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00031195
(600 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308898.1| condensin complex components subunit [Populu... 266 2e-69
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ... 263 2e-68
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22... 260 1e-67
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,... 250 2e-64
ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like ... 250 2e-64
>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
gi|222854874|gb|EEE92421.1| condensin complex components
subunit [Populus trichocarpa]
Length = 1334
Score = 266 bits (681), Expect = 2e-69
Identities = 143/203 (70%), Positives = 166/203 (81%), Gaps = 4/203 (1%)
Frame = +3
Query: 3 AEIAAGRLEDKSAMVRKSALNLLIAMLQHNPFGPQLRIVSFEATLEKYKEKLCEPEPGVD 182
A +AAGRLEDKSA+VRK+ALNLLI MLQHNPFGPQLRI SF+ATLE+Y +KL E EP
Sbjct: 421 AAVAAGRLEDKSAIVRKAALNLLIMMLQHNPFGPQLRIASFQATLEQYNKKLNELEPDKS 480
Query: 183 VESHLDGNLSDNNTC---EVDCTRTKGETVEEHD-ISDSVPNVEDGVIQNDSLLPNIGNS 350
ES LDG SDN T EVD + E+ + ++DSVPN+E+G+ Q DS +P+IGN
Sbjct: 481 AESVLDGLQSDNETYDGGEVDDVNMEEPVKEQQESLTDSVPNLEEGIPQKDSSVPDIGNL 540
Query: 351 EQNRALVASLEAGLRFSKCLSNTMPTLVQLMASSSVTDVENTILLLMRCRQFEVDGSEAC 530
EQ RALVASLEAGL FSKC+S TMPTLVQLMASSS TDVENTILLLMRC+QF++DG+EAC
Sbjct: 541 EQTRALVASLEAGLIFSKCVSATMPTLVQLMASSSATDVENTILLLMRCKQFQIDGAEAC 600
Query: 531 LRKMLPLVFSQDKSISDAVEDAF 599
LRKMLPLVFSQDKSI +AVE+AF
Sbjct: 601 LRKMLPLVFSQDKSIYEAVENAF 623
>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
Length = 1346
Score = 263 bits (672), Expect = 2e-68
Identities = 141/208 (67%), Positives = 165/208 (79%), Gaps = 9/208 (4%)
Frame = +3
Query: 3 AEIAAGRLEDKSAMVRKSALNLLIAMLQHNPFGPQLRIVSFEATLEKYKEKLCEPEPGVD 182
A +AAGRLEDKSA+VRKSALNLLI MLQHNPFGPQLRI SFEATLE+YK+KL E +P +
Sbjct: 413 AAVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRIASFEATLEQYKKKLNELQPNLA 472
Query: 183 VESHLDGNLSDNNTCEVDCTRTKGETVE--------EHDISDS-VPNVEDGVIQNDSLLP 335
ES LDG SD +TC D G E + ++DS +P+ +G+++NDS +P
Sbjct: 473 SESVLDGLPSDGDTCNGDGEVDSGNEEEVGQVAKGQQDSLTDSCLPHTAEGIVENDSPVP 532
Query: 336 NIGNSEQNRALVASLEAGLRFSKCLSNTMPTLVQLMASSSVTDVENTILLLMRCRQFEVD 515
++GN EQ RALVASLEAGLRFSKC+S TMPTLVQLMASSS TDVENTILLLMRC+QF+VD
Sbjct: 533 DVGNLEQTRALVASLEAGLRFSKCVSATMPTLVQLMASSSATDVENTILLLMRCKQFQVD 592
Query: 516 GSEACLRKMLPLVFSQDKSISDAVEDAF 599
GSEACLRKM PLVFSQDKS +AVE+AF
Sbjct: 593 GSEACLRKMFPLVFSQDKSTYEAVENAF 620
>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
condensin, putative [Ricinus communis]
Length = 1346
Score = 260 bits (664), Expect = 1e-67
Identities = 139/205 (67%), Positives = 162/205 (79%), Gaps = 6/205 (2%)
Frame = +3
Query: 3 AEIAAGRLEDKSAMVRKSALNLLIAMLQHNPFGPQLRIVSFEATLEKYKEKLCEPEPGVD 182
A +AAGRLEDK+AMVRK+ALNLLI MLQHNPFGPQLRI SFEATLE+YK+KL E EP
Sbjct: 425 AAVAAGRLEDKTAMVRKAALNLLIMMLQHNPFGPQLRIASFEATLEQYKKKLNELEPDES 484
Query: 183 VESHLDGNLSDNNTC----EVDCTRTK--GETVEEHDISDSVPNVEDGVIQNDSLLPNIG 344
++ DG SDN+ EVD + E +E +P++EDG+ Q DS +P++G
Sbjct: 485 AQNARDGLKSDNDASDGGDEVDNVNAEEVAEKQQESLTDSCLPHLEDGITQKDSSVPDVG 544
Query: 345 NSEQNRALVASLEAGLRFSKCLSNTMPTLVQLMASSSVTDVENTILLLMRCRQFEVDGSE 524
N EQ RALVASLEAGLRFSKC+S TMPTLVQLMASSS TDVENTILLLMRCRQF++DG+E
Sbjct: 545 NLEQTRALVASLEAGLRFSKCISATMPTLVQLMASSSATDVENTILLLMRCRQFQIDGAE 604
Query: 525 ACLRKMLPLVFSQDKSISDAVEDAF 599
CLRKMLPLVFSQDKSI +AVE+AF
Sbjct: 605 ECLRKMLPLVFSQDKSIYEAVENAF 629
>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
sativus]
Length = 1133
Score = 250 bits (638), Expect = 2e-64
Identities = 140/206 (67%), Positives = 162/206 (78%), Gaps = 7/206 (3%)
Frame = +3
Query: 3 AEIAAGRLEDKSAMVRKSALNLLIAMLQHNPFGPQLRIVSFEATLEKYKEKLCEPEPG-- 176
A +AAGRLEDKSA+VRKSAL LLI+MLQHNPFGPQLR+VSFEATLE+YK+KL E EP
Sbjct: 414 AAVAAGRLEDKSAIVRKSALQLLISMLQHNPFGPQLRVVSFEATLEQYKKKLDELEPNKS 473
Query: 177 ---VDVESHLDGNLSDNNTCEVDCTRTKGETVEEHD-ISDSVP-NVEDGVIQNDSLLPNI 341
VD S DG++ N EVD KGE D ++DS P +E+ V+Q D+L ++
Sbjct: 474 SENVDGGSPFDGDIF-NGDGEVDNGHIKGEGGNRQDSLTDSYPPQMEEEVVQKDNLTLDV 532
Query: 342 GNSEQNRALVASLEAGLRFSKCLSNTMPTLVQLMASSSVTDVENTILLLMRCRQFEVDGS 521
GN+EQ RALVASLEAGLRFS C+S MP LVQLMASSS TDVENTILLLMRCRQF++DGS
Sbjct: 533 GNTEQIRALVASLEAGLRFSTCISEAMPILVQLMASSSATDVENTILLLMRCRQFQIDGS 592
Query: 522 EACLRKMLPLVFSQDKSISDAVEDAF 599
EACLRKMLPL FSQDKSI +AVE+AF
Sbjct: 593 EACLRKMLPLAFSQDKSIYEAVENAF 618
>ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like [Cucumis sativus]
Length = 1321
Score = 250 bits (638), Expect = 2e-64
Identities = 140/206 (67%), Positives = 162/206 (78%), Gaps = 7/206 (3%)
Frame = +3
Query: 3 AEIAAGRLEDKSAMVRKSALNLLIAMLQHNPFGPQLRIVSFEATLEKYKEKLCEPEPG-- 176
A +AAGRLEDKSA+VRKSAL LLI+MLQHNPFGPQLR+VSFEATLE+YK+KL E EP
Sbjct: 414 AAVAAGRLEDKSAIVRKSALQLLISMLQHNPFGPQLRVVSFEATLEQYKKKLDELEPNKS 473
Query: 177 ---VDVESHLDGNLSDNNTCEVDCTRTKGETVEEHD-ISDSVP-NVEDGVIQNDSLLPNI 341
VD S DG++ N EVD KGE D ++DS P +E+ V+Q D+L ++
Sbjct: 474 SENVDGGSPFDGDIF-NGDGEVDNGHIKGEGGNRQDSLTDSYPPQMEEEVVQKDNLTLDV 532
Query: 342 GNSEQNRALVASLEAGLRFSKCLSNTMPTLVQLMASSSVTDVENTILLLMRCRQFEVDGS 521
GN+EQ RALVASLEAGLRFS C+S MP LVQLMASSS TDVENTILLLMRCRQF++DGS
Sbjct: 533 GNTEQIRALVASLEAGLRFSTCISEAMPILVQLMASSSATDVENTILLLMRCRQFQIDGS 592
Query: 522 EACLRKMLPLVFSQDKSISDAVEDAF 599
EACLRKMLPL FSQDKSI +AVE+AF
Sbjct: 593 EACLRKMLPLAFSQDKSIYEAVENAF 618