BLASTX nr result

ID: Cimicifuga21_contig00031184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031184
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283086.1| PREDICTED: arabinogalactan peptide 22 [Vitis...    75   7e-12
gb|AEC10998.1| hypothetical protein [Camellia sinensis]                73   2e-11
ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thalian...    70   2e-10
gb|AFK43645.1| unknown [Lotus japonicus]                               70   2e-10
ref|XP_002974418.1| hypothetical protein SELMODRAFT_29789 [Selag...    69   4e-10

>ref|XP_002283086.1| PREDICTED: arabinogalactan peptide 22 [Vitis vinifera]
           gi|147854885|emb|CAN82800.1| hypothetical protein
           VITISV_022699 [Vitis vinifera]
           gi|297738720|emb|CBI27965.3| unnamed protein product
           [Vitis vinifera]
          Length = 65

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = +3

Query: 93  MELKRVSYTTMALLAFIVALVFSAAAGAQS-PEPAVAPTSDGVAIDQGIAYVLMFAALLL 269
           ME+ R+S+  M +LA ++AL   ++  A+S P PA AP+SDGVAIDQGIAYVLM  AL L
Sbjct: 1   MEMFRISFMVMGVLALVLALGIPSSINAESSPAPAPAPSSDGVAIDQGIAYVLMLLALAL 60

Query: 270 TYIIH 284
           TYIIH
Sbjct: 61  TYIIH 65


>gb|AEC10998.1| hypothetical protein [Camellia sinensis]
          Length = 68

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
 Frame = +3

Query: 93  MELKRVSYTTMALLAFIVALV---FSAAAGAQSPEPAVAPTSDGVAIDQGIAYVLMFAAL 263
           M++ RV++  M  +A ++ALV    +A A   +P PA APTSDGVA+DQGIAYVLM  AL
Sbjct: 1   MKMLRVNFVVMGFMALVLALVVPSINAHAHVPAPAPAPAPTSDGVAVDQGIAYVLMLLAL 60

Query: 264 LLTYIIH 284
            LTYIIH
Sbjct: 61  ALTYIIH 67


>ref|NP_566070.3| arabinogalactan protein 16 [Arabidopsis thaliana]
           gi|297828351|ref|XP_002882058.1| hypothetical protein
           ARALYDRAFT_483786 [Arabidopsis lyrata subsp. lyrata]
           gi|75100629|sp|O82337.1|AGP16_ARATH RecName:
           Full=Arabinogalactan peptide 16; Short=AG-peptide 16;
           Flags: Precursor gi|10880509|gb|AAG24284.1|AF195897_1
           arabinogalactan protein [Arabidopsis thaliana]
           gi|15294170|gb|AAK95262.1|AF410276_1 At2g46330/F11C10.2
           [Arabidopsis thaliana] gi|4559376|gb|AAD23036.1|
           expressed protein [Arabidopsis thaliana]
           gi|20197373|gb|AAM15047.1| expressed protein
           [Arabidopsis thaliana] gi|20453295|gb|AAM19886.1|
           At2g46330/F11C10.2 [Arabidopsis thaliana]
           gi|21553759|gb|AAM62852.1| unknown [Arabidopsis
           thaliana] gi|297327897|gb|EFH58317.1| hypothetical
           protein ARALYDRAFT_483786 [Arabidopsis lyrata subsp.
           lyrata] gi|330255586|gb|AEC10680.1| arabinogalactan
           protein 16 [Arabidopsis thaliana]
          Length = 73

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = +3

Query: 105 RVSYTTMALLAFIVALVFSAAAGAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLTYIIH 284
           R S T  AL +F+ A++ S A GAQS  PA APTSDG +IDQGIAY+LM  AL+LTY+IH
Sbjct: 4   RNSVTGFALFSFVFAVILSLA-GAQSLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62


>gb|AFK43645.1| unknown [Lotus japonicus]
          Length = 63

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/64 (56%), Positives = 44/64 (68%)
 Frame = +3

Query: 93  MELKRVSYTTMALLAFIVALVFSAAAGAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLT 272
           ME+ RV    M++LA  +A V  +   AQ P PA APTSDG+ +DQG+AYVLM  AL LT
Sbjct: 1   MEVFRVQLFVMSILALAIAFVIPSI-NAQVPAPAPAPTSDGITVDQGVAYVLMMLALALT 59

Query: 273 YIIH 284
           YIIH
Sbjct: 60  YIIH 63


>ref|XP_002974418.1| hypothetical protein SELMODRAFT_29789 [Selaginella moellendorffii]
           gi|300158016|gb|EFJ24640.1| hypothetical protein
           SELMODRAFT_29789 [Selaginella moellendorffii]
          Length = 63

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/53 (66%), Positives = 41/53 (77%)
 Frame = +3

Query: 126 ALLAFIVALVFSAAAGAQSPEPAVAPTSDGVAIDQGIAYVLMFAALLLTYIIH 284
           AL   +V L+ S A   +SP PA AP SDGV+IDQGIAYVLMFAAL+LTY+IH
Sbjct: 1   ALATAMVLLLGSVAIAQESPAPAPAPQSDGVSIDQGIAYVLMFAALVLTYLIH 53


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