BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031137
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]    73   5e-11
ref|XP_002886081.1| pentatricopeptide repeat-containing protein ...    71   2e-10

>ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
           gi|449529106|ref|XP_004171542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 44/96 (45%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
 Frame = +3

Query: 345 LLSFFKWCQTHLPNFXXXXXXXXXXXXXXXXXI-RFKKFSDTKSLLISFIAQDCQHSLHD 521
           LL+ FKW Q H+P+F                 + R   FSD KSLLISFI+ D QH LH 
Sbjct: 67  LLNVFKWAQKHVPSFSSPPNNSLSSLLTLLPSLFRHYMFSDAKSLLISFISSDRQHELHK 126

Query: 522 NLIHPSSRYPPPSKALLDTAITCYVHAKKPYLAVQI 629
            ++HP+   P PSK LLDT+I  YV   +P+LA QI
Sbjct: 127 LILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQI 162


>ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 42/95 (44%), Positives = 56/95 (58%)
 Frame = +3

Query: 345 LLSFFKWCQTHLPNFXXXXXXXXXXXXXXXXXIRFKKFSDTKSLLISFIAQDCQHSLHDN 524
           LLSFF+W QTH P                   +  +KFSD KSLL+SFI+ D +H+LH  
Sbjct: 32  LLSFFRWLQTHAP--PSLCSSPDLLLSLLPPLLARRKFSDAKSLLLSFISSDHRHALHSL 89

Query: 525 LIHPSSRYPPPSKALLDTAITCYVHAKKPYLAVQI 629
           L+ P+   P  SK LLDT++  YVHA +P+LA Q+
Sbjct: 90  LLRPN---PALSKPLLDTSLAAYVHANQPHLAFQL 121


>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 44/95 (46%), Positives = 54/95 (56%)
 Frame = +3

Query: 345 LLSFFKWCQTHLPNFXXXXXXXXXXXXXXXXXIRFKKFSDTKSLLISFIAQDCQHSLHDN 524
           L+SFFKW QT+LP F                  R  KFSD KSLL+ FIA D +H LH +
Sbjct: 69  LISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHR--KFSDAKSLLLGFIATDRRHDLHLS 126

Query: 525 LIHPSSRYPPPSKALLDTAITCYVHAKKPYLAVQI 629
           ++    R   PSKALLDTAI  YV + +P+ A QI
Sbjct: 127 IL----RLTSPSKALLDTAIGAYVQSGQPHHAFQI 157


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 44/95 (46%), Positives = 54/95 (56%)
 Frame = +3

Query: 345 LLSFFKWCQTHLPNFXXXXXXXXXXXXXXXXXIRFKKFSDTKSLLISFIAQDCQHSLHDN 524
           L+SFFKW QT+LP F                  R  KFSD KSLL+ FIA D +H LH +
Sbjct: 69  LISFFKWAQTNLPTFPHNSLPSLLSLLPSLFSHR--KFSDAKSLLLGFIATDRRHDLHLS 126

Query: 525 LIHPSSRYPPPSKALLDTAITCYVHAKKPYLAVQI 629
           ++    R   PSKALLDTAI  YV + +P+ A QI
Sbjct: 127 IL----RLTSPSKALLDTAIGAYVQSGQPHHAFQI 157


>ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331921|gb|EFH62340.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 743

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +3

Query: 342 TLLSFFKWCQTHLPNFXXXXXXXXXXXXXXXXXIRFKKFSDTKSLLISFI-AQDCQHSLH 518
           TL+SFF+W Q+ +P                   +   KF+D KSLL+S+I   D   SL 
Sbjct: 57  TLVSFFQWAQSSIPE-AFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLC 115

Query: 519 DNLIHPSSRY-PPPSKALLDTAITCYVHAKKPYLAVQI 629
           ++L+HP+    PPPSKAL D A++ Y+HA KP++A+Q+
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQV 153