BLASTX nr result

ID: Cimicifuga21_contig00031104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031104
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]    43   3e-06
emb|CAN73460.1| hypothetical protein VITISV_033905 [Vitis vinifera]    41   6e-06
emb|CAN61030.1| hypothetical protein VITISV_003969 [Vitis vinifera]    39   6e-06

>emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]
          Length = 1074

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = -1

Query: 584  ISDYLERDENEVVWNVVLRRGFNYWEVDMFGDLMTLIYHAVEG---FGLENSGWWWLRRS 414
            I +  ++D  +  WN+V  R FN WE+DM GDL+    H + G   F  ++S  W   R+
Sbjct: 875  IEEMWDQDSGQGDWNLVFVRDFNDWELDMVGDLL----HTLRGHRPFLEDDSVMWRQGRN 930

Query: 413  EVFTVNAFYEELAK 372
             +F V   Y  L K
Sbjct: 931  GLFKVKEAYRLLDK 944



 Score = 33.9 bits (76), Expect(2) = 3e-06
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 306  TSPFYFMWVAFFMRIQTVDNLEGRGVIIPDVYSLCNIEDEDV 181
            T   +F W A + ++ T+D L+ RGV +P+   LC  E+E++
Sbjct: 962  TKVCFFAWEATWGKVLTLDRLQIRGVQLPNWCFLCGCEEENL 1003


>emb|CAN73460.1| hypothetical protein VITISV_033905 [Vitis vinifera]
          Length = 735

 Score = 41.2 bits (95), Expect(2) = 6e-06
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = -1

Query: 584 ISDYLERDENEVVWNVVLRRGFNYWEVDMFGDLMTLIYHAVEGF--GLENSGWWWLR-RS 414
           I +  ++D  +  W +V  R FN WE+DM G+L+    H + G+   LE+    W + R+
Sbjct: 319 IEEMWDQDSGQGDWKLVFVRDFNDWEMDMVGELL----HTLRGYRPSLEDDSVVWRQGRN 374

Query: 413 EVFTVNAFYEELAK 372
            +F +   Y +L K
Sbjct: 375 GIFKIKEAYRQLDK 388



 Score = 34.3 bits (77), Expect(2) = 6e-06
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = -3

Query: 306 TSPFYFMWVAFFMRIQTVDNLEGRGVIIPDVYSLCNIEDED 184
           T   +F W A + ++ T+D L+ RGV +P+   LC  E+E+
Sbjct: 406 TKVCFFAWEATWGKVLTLDRLQLRGVHLPNCCFLCGCEEEN 446


>emb|CAN61030.1| hypothetical protein VITISV_003969 [Vitis vinifera]
          Length = 664

 Score = 39.3 bits (90), Expect(2) = 6e-06
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = -1

Query: 584 ISDYLERDENEVVWNVVLRRGFNYWEVDMFGDLMTLIYHAVEGF--GLENSGWWWLR-RS 414
           I +  ++D  +  W +V  R FN WE+DM G+L+    H + G+   LE+    W + R+
Sbjct: 486 IEEMWDQDSGQGDWKLVFVRDFNDWEMDMVGELL----HTLRGYRPSLEDDSVVWRQGRN 541

Query: 413 EVFTVNAFYEELAK 372
            +F +   Y  L K
Sbjct: 542 GIFKIKEAYRLLDK 555



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -3

Query: 306 TSPFYFMWVAFFMRIQTVDNLEGRGVIIPDVYSLCNIEDEDVGTYL 169
           T   +F W A + ++ T+D L+ RGV +P+   LC  E+E+V   L
Sbjct: 573 TKVCFFAWEATWGKVLTLDRLQLRGVHLPNCCFLCGCEEENVNHIL 618


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