BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031096
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]   114   1e-23
ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Rici...    80   3e-13
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...    66   5e-09
emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]    66   5e-09
ref|NP_177375.1| RING-H2 finger protein ATL3 [Arabidopsis thalia...    65   1e-08

>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score =  114 bits (285), Expect = 1e-23
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
 Frame = -1

Query: 590 LRLLPDCRHAFHVQCIDQWFFSHSNCPVCRTPIVHPYMXXXXXXXXXXXXXENSGSNDDV 411
           +RLLP C HAFH+ CID+WF  H+NCP+CR+P+                   N  +    
Sbjct: 106 VRLLPSCHHAFHITCIDEWFVGHTNCPLCRSPVT------AVLSLSNAIEEGNGFNRPTA 159

Query: 410 EAVPQPEMGQ---IRLHQHSASVVLPREGKLSSLSGVLKRSLSLDYAYVCVKVQRDTESN 240
           +   Q   G    ++L +H  S VL  +GK   +   LKRSLS+  +YV + +QR++E  
Sbjct: 160 QFQHQRSNGSDLGLQL-RHCESCVLHMDGKPRPVMAGLKRSLSMGQSYVIIDIQRESERA 218

Query: 239 SPSSSTLNAMFLRNKSYKVGSSKRLDRVSSMLTRSCSRLRSNQSAAADAVLP 84
           S SSS   A+  R++SYK  S ++LDR SS L RS SRLR   S  A+ +LP
Sbjct: 219 SSSSS--KAILGRSRSYKARSMRQLDRASSTLRRSYSRLRMGLSGRANQILP 268


>ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223541293|gb|EEF42844.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 329

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 58/228 (25%)
 Frame = -1

Query: 590 LRLLPDCRHAFHVQCIDQWFFSHSNC-----PVCRTPI---------------------- 492
           +R LP+C H FHV CID W  +H+NC     P+  +P                       
Sbjct: 103 VRSLPNCGHVFHVPCIDGWLSAHTNCPICRAPIVSSPPPPAAAASTPNSDHHITSVLRES 162

Query: 491 --------------VHPYMXXXXXXXXXXXXXENSGSNDDVEAVPQPEMGQIRLHQHSAS 354
                         +  ++              ++ S +   A     +   R   HS S
Sbjct: 163 PSINIGRRERNTQNLAQFLEQGDEDGTSTSTGISTNSVNASTAAAAASLQSTRKLLHSLS 222

Query: 353 VVLPREGKLSSLSGVLKRSLSLDYAYVCVKVQRDTE--------------SNSPSS--ST 222
           +VLP EGK  S +  LKRSLS+D  +V + +Q +++              S+SPS   S+
Sbjct: 223 LVLPVEGKQQSFTK-LKRSLSMDQCFVIIDIQAESDDHEKASSSCSSSASSSSPSKCDSS 281

Query: 221 LNAMFLRNKSYKVGSSKRLDRVSSMLTRSCSRLRSNQSA-AADAVLPC 81
           L  +   N++Y+  S ++LDRVSS L RS S++R  QSA  +   LPC
Sbjct: 282 LKGISAENRTYRAISMRQLDRVSSRLLRSFSQIRFGQSAVTSHDTLPC 329


>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -1

Query: 590 LRLLPDCRHAFHVQCIDQWFFSHSNCPVCRTPIVHPYMXXXXXXXXXXXXXENSGSNDDV 411
           LRLLP C HAFHV CID W  SH NCP+CR PI+H  +              +SGS +D+
Sbjct: 142 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPIIHENV--GSHLNAVEQDSNDSGSREDM 199

Query: 410 E 408
           E
Sbjct: 200 E 200


>emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]
          Length = 371

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 30/61 (49%), Positives = 36/61 (59%)
 Frame = -1

Query: 590 LRLLPDCRHAFHVQCIDQWFFSHSNCPVCRTPIVHPYMXXXXXXXXXXXXXENSGSNDDV 411
           LRLLP C HAFHV CID W  SH NCP+CR PI+H  +              +SGS +D+
Sbjct: 141 LRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPIIHENV--GSHLNAVEQDSNDSGSREDM 198

Query: 410 E 408
           E
Sbjct: 199 E 199


>ref|NP_177375.1| RING-H2 finger protein ATL3 [Arabidopsis thaliana]
           gi|68565343|sp|Q9XF63.1|ATL3_ARATH RecName: Full=RING-H2
           finger protein ATL3 gi|4928397|gb|AAD33581.1|AF132013_1
           RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana]
           gi|12323672|gb|AAG51805.1|AC067754_21 RING-H2 zinc
           finger protein ATL3; 90350-91324 [Arabidopsis thaliana]
           gi|12325277|gb|AAG52584.1|AC016529_15 RING-H2 zinc
           finger protein (ATL3); 86824-85850 [Arabidopsis
           thaliana] gi|33589686|gb|AAQ22609.1| At1g72310
           [Arabidopsis thaliana] gi|110743698|dbj|BAE99686.1|
           RING-H2 zinc finger protein [Arabidopsis thaliana]
           gi|332197180|gb|AEE35301.1| RING-H2 finger protein ATL3
           [Arabidopsis thaliana]
          Length = 324

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
 Frame = -1

Query: 587 RLLPDCRHAFHVQCIDQWFFSHSNCPVCRTPIVHPYMXXXXXXXXXXXXXENSG-SNDDV 411
           RLLP C H+FHV+CID WF SHS CP+CR  ++ P               EN+G +N++ 
Sbjct: 141 RLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTTNNNH 200

Query: 410 EAVPQ-----PEM--------GQIRLHQHSASVVLPREGKLSSLSGVLKRSLSLDYAYVC 270
           +A+ Q     PE          Q ++   + +V    +G   + +   + ++ LD     
Sbjct: 201 DALSQLSTSSPEFPTNVLVWGRQDQVSTGNTNVGTQEDGAAGNGASQSQEAVVLD----- 255

Query: 269 VKVQRDTESNSPSSSTLNAMFLRNKSYKVGSSKRLDRVSSMLTR----SCSRLRSNQSAA 102
           +        N  SSS+     +  +  K   + RL  +   L+R     CS   ++ S++
Sbjct: 256 ISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSRDKRVGCSNSSTSNSSS 315

Query: 101 ADAV 90
           ++AV
Sbjct: 316 SNAV 319