BLASTX nr result

ID: Cimicifuga21_contig00031058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00031058
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588293.1| chloroplast hypothetical protein [Zea mays subs...    97   3e-22
emb|CBI32838.3| unnamed protein product [Vitis vinifera]               80   1e-13
gb|EEF11803.1| predicted protein [Populus trichocarpa]                 78   7e-13
gb|EEE74742.1| predicted protein [Populus trichocarpa]                 78   7e-13
ref|XP_003610225.1| hypothetical protein MTR_4g129340 [Medicago ...    65   8e-09

>ref|YP_588293.1| chloroplast hypothetical protein [Zea mays subsp. mays]
           gi|40795075|gb|AAR91119.1| chloroplast hypothetical
           protein (mitochondrion) [Zea mays]
          Length = 121

 Score = 97.4 bits (241), Expect(2) = 3e-22
 Identities = 45/54 (83%), Positives = 48/54 (88%)
 Frame = +3

Query: 99  YDSTQFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRH 260
           YDST+  +F SSIYD +FMDVDKILPFSSTLGWHSL VNGEVQ RKGLRWIPRH
Sbjct: 18  YDSTEGCQFVSSIYDFAFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRH 71



 Score = 32.7 bits (73), Expect(2) = 3e-22
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +2

Query: 41 MSAVRVRLSPARELSRY 91
          MSAVRVRLSPARELS Y
Sbjct: 1  MSAVRVRLSPARELSGY 17


>emb|CBI32838.3| unnamed protein product [Vitis vinifera]
          Length = 87

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/40 (90%), Positives = 36/40 (90%)
 Frame = -3

Query: 150 MINHRSNCRIGKIGCYHIPLYRLSSRAGDKRTRTADIRHR 31
           MINHRSNCRIGKIGCYHI LYRLSSR GDKRTRTAD  HR
Sbjct: 1   MINHRSNCRIGKIGCYHITLYRLSSRVGDKRTRTADFHHR 40


>gb|EEF11803.1| predicted protein [Populus trichocarpa]
          Length = 64

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +3

Query: 153 MDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRH 260
           MDVDKILPFSSTLGWHSLKV GEVQTRKGLRWIPRH
Sbjct: 1   MDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRH 36


>gb|EEE74742.1| predicted protein [Populus trichocarpa]
          Length = 61

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = +3

Query: 153 MDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRH 260
           MDVDKILPFSSTLGWHSLKV GEVQTRKGLRWIPRH
Sbjct: 1   MDVDKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRH 36


>ref|XP_003610225.1| hypothetical protein MTR_4g129340 [Medicago truncatula]
           gi|355511280|gb|AES92422.1| hypothetical protein
           MTR_4g129340 [Medicago truncatula]
          Length = 303

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/36 (83%), Positives = 31/36 (86%)
 Frame = +3

Query: 153 MDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRH 260
           MDVDKILP SSTLGW  L+V GEVQTRKGL WIPRH
Sbjct: 1   MDVDKILPSSSTLGWPRLQVKGEVQTRKGLWWIPRH 36


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