BLASTX nr result

ID: Cimicifuga21_contig00030484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030484
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]   135   3e-30
emb|CBI39572.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like...   133   1e-29
ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   122   4e-26
gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      120   1e-25

>emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
          Length = 1640

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/79 (81%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
 Frame = -1

Query: 234 RMDG-ELELEKARLLSLALDFGFDEESANKCLDRLIHLYGKDGREFITVEHCGDDYLAAL 58
           RMDG +LE+EKARLLSLALDFGFDEESA KCLDRL+HLYG DG++FITVEHCGDD+LAAL
Sbjct: 94  RMDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAAL 153

Query: 57  AEFMQDSEDWDDLQAMESE 1
            E ++DSEDWDDLQA+E+E
Sbjct: 154 VESVEDSEDWDDLQAIETE 172


>emb|CBI39572.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/78 (80%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
 Frame = -1

Query: 231 MDG-ELELEKARLLSLALDFGFDEESANKCLDRLIHLYGKDGREFITVEHCGDDYLAALA 55
           MDG +LE+EKARLLSLALDFGFDEESA KCLDRL+HLYG DG++FITVEHCGDD+LAAL 
Sbjct: 1   MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV 60

Query: 54  EFMQDSEDWDDLQAMESE 1
           E ++DSEDWDDLQA+E+E
Sbjct: 61  ESVEDSEDWDDLQAIETE 78


>ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
           vinifera]
          Length = 602

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/78 (80%), Positives = 73/78 (93%), Gaps = 1/78 (1%)
 Frame = -1

Query: 231 MDG-ELELEKARLLSLALDFGFDEESANKCLDRLIHLYGKDGREFITVEHCGDDYLAALA 55
           MDG +LE+EKARLLSLALDFGFDEESA KCLDRL+HLYG DG++FITVEHCGDD+LAAL 
Sbjct: 1   MDGHDLEMEKARLLSLALDFGFDEESAMKCLDRLVHLYGDDGQDFITVEHCGDDFLAALV 60

Query: 54  EFMQDSEDWDDLQAMESE 1
           E ++DSEDWDDLQA+E+E
Sbjct: 61  ESVEDSEDWDDLQAIETE 78


>ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           1-like [Glycine max]
          Length = 612

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/74 (79%), Positives = 67/74 (90%)
 Frame = -1

Query: 222 ELELEKARLLSLALDFGFDEESANKCLDRLIHLYGKDGREFITVEHCGDDYLAALAEFMQ 43
           +LELEK RL+SLAL+FGFDE SANKCLDRLI LYG+DGR+FITVEHCGDD+LAALAE MQ
Sbjct: 11  DLELEKVRLISLALEFGFDESSANKCLDRLIALYGEDGRDFITVEHCGDDFLAALAESMQ 70

Query: 42  DSEDWDDLQAMESE 1
            +EDWDD Q MES+
Sbjct: 71  -TEDWDDQQEMESQ 83


>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/76 (77%), Positives = 68/76 (89%), Gaps = 2/76 (2%)
 Frame = -1

Query: 222 ELELEKARLLSLALDFGFDEESANKCLDRLIHLYGKDGREFITVEHCGDDYLAALAEFMQ 43
           +LELE+AR LSLAL+FGFDEESANKCLDRLI LYG+DG++FITVE CGDD+L ALAE MQ
Sbjct: 5   DLELERARFLSLALEFGFDEESANKCLDRLISLYGEDGQDFITVECCGDDFLVALAESMQ 64

Query: 42  DSEDW--DDLQAMESE 1
           D+EDW  DDLQ +ESE
Sbjct: 65  DTEDWGDDDLQIIESE 80


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