BLASTX nr result

ID: Cimicifuga21_contig00030477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030477
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63854.1| hypothetical protein VITISV_008851 [Vitis vinifera]   103   2e-20
ref|XP_002278264.1| PREDICTED: uncharacterized protein LOC100256...   101   5e-20
emb|CAN63802.1| hypothetical protein VITISV_035238 [Vitis vinifera]   101   5e-20
ref|XP_002311813.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002516836.1| conserved hypothetical protein [Ricinus comm...    97   2e-18

>emb|CAN63854.1| hypothetical protein VITISV_008851 [Vitis vinifera]
          Length = 92

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 9/89 (10%)
 Frame = -2

Query: 375 MASSTAGVSIRTVFIILLILAAFYVGRPLYWKLSATIQEIREKKTTVTQGISKFVMEARK 196
           MA+STA VS R + +ILLIL  FYVGRPLYWK+SAT+ EIR+ K TV QGIS+FV EA+K
Sbjct: 1   MATSTARVSFRVIVVILLILLLFYVGRPLYWKISATVHEIRQNKQTVKQGISQFVFEAQK 60

Query: 195 SVGWINDES---------YAVATSRRLLR 136
           SVGW +DES          A A +R++LR
Sbjct: 61  SVGWFHDESDSGLREDRNAAAAANRKILR 89


>ref|XP_002278264.1| PREDICTED: uncharacterized protein LOC100256211 [Vitis vinifera]
           gi|297736938|emb|CBI26139.3| unnamed protein product
           [Vitis vinifera]
          Length = 92

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
 Frame = -2

Query: 375 MASSTAGVSIRTVFIILLILAAFYVGRPLYWKLSATIQEIREKKTTVTQGISKFVMEARK 196
           MA+STA VS R +  ILLIL  FYVGRPLYWK+SAT+ EIR+ K TV QGIS+FV EA+K
Sbjct: 1   MATSTARVSFRVIVAILLILLLFYVGRPLYWKISATVHEIRQNKQTVKQGISQFVFEAQK 60

Query: 195 SVGWINDES---------YAVATSRRLLR 136
           SVGW +DES          A A +R++LR
Sbjct: 61  SVGWFHDESDSGLREDRNAAAAANRKILR 89


>emb|CAN63802.1| hypothetical protein VITISV_035238 [Vitis vinifera]
          Length = 825

 Score =  101 bits (252), Expect = 5e-20
 Identities = 53/89 (59%), Positives = 64/89 (71%), Gaps = 9/89 (10%)
 Frame = -2

Query: 375 MASSTAGVSIRTVFIILLILAAFYVGRPLYWKLSATIQEIREKKTTVTQGISKFVMEARK 196
           MA+STA VS R +  ILLIL  FYVGRPLYWK+SAT+ EIR+ K TV QGIS+FV EA+K
Sbjct: 1   MATSTARVSFRVIVAILLILLLFYVGRPLYWKISATVHEIRQNKQTVKQGISQFVFEAQK 60

Query: 195 SVGWINDES---------YAVATSRRLLR 136
           SVGW +DES          A A +R++LR
Sbjct: 61  SVGWFHDESDSGLREDRNAAAAANRKILR 89


>ref|XP_002311813.1| predicted protein [Populus trichocarpa] gi|222851633|gb|EEE89180.1|
           predicted protein [Populus trichocarpa]
          Length = 83

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/80 (62%), Positives = 58/80 (72%)
 Frame = -2

Query: 375 MASSTAGVSIRTVFIILLILAAFYVGRPLYWKLSATIQEIREKKTTVTQGISKFVMEARK 196
           MAS+T  V  R V  IL IL  FYVGRPLYWK+SAT+QEIRE K TV QGIS+ V EA+K
Sbjct: 1   MASATTRVIFRVVVGILAILVLFYVGRPLYWKISATVQEIRENKRTVKQGISQIVFEAQK 60

Query: 195 SVGWINDESYAVATSRRLLR 136
           SVGW +DES + A   R +R
Sbjct: 61  SVGWFHDESGSGARQNRRVR 80


>ref|XP_002516836.1| conserved hypothetical protein [Ricinus communis]
           gi|223543924|gb|EEF45450.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/85 (58%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
 Frame = -2

Query: 375 MASSTAGVSIRTVFIILLILAAFYVGRPLYWKLSATIQEIREKKTTVTQGISKFVMEARK 196
           MAS TA ++ R V  IL+++  FYVGRPLYWK+SAT+QEIRE K TV QGIS+ V EA+K
Sbjct: 1   MASPTARITFRVVIAILVVMLLFYVGRPLYWKISATVQEIRENKRTVQQGISQIVYEAQK 60

Query: 195 SVGWINDESYA------VATSRRLL 139
           SVGW +DES +       A +RRLL
Sbjct: 61  SVGWFHDESDSGVREDRKAINRRLL 85


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