BLASTX nr result

ID: Cimicifuga21_contig00030471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030471
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522751.1| RNA-binding protein, putative [Ricinus commu...   239   6e-61
ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cuc...   214   2e-53
ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   214   2e-53
ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212...   214   2e-53
ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212...   214   2e-53

>ref|XP_002522751.1| RNA-binding protein, putative [Ricinus communis]
           gi|223537989|gb|EEF39602.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 702

 Score =  239 bits (610), Expect = 6e-61
 Identities = 120/190 (63%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
 Frame = -3

Query: 728 MMHP---MGQGFDPAXXXXXXXXXXXXGFPAAPTPPFSQMLSPFXXXXXXXXXXXXXXVN 558
           ++HP   MGQGFDPA            GFP APTPPFS +LS F              VN
Sbjct: 418 LLHPNSMMGQGFDPAFGAPMGRMGSYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHVN 477

Query: 557 PAFFGRGMPANGMGMMNTTGIDGHGMGMWSDPSTSGWGGED-PSGRAAESSYGDDAGSDH 381
           PAFFGRGMP NGMGMM TTG+DG  MGMWSDPS  GWG ED   GRA ESSYG++A SDH
Sbjct: 478 PAFFGRGMPMNGMGMMPTTGVDGPNMGMWSDPSMGGWGVEDHGGGRAGESSYGEEAASDH 537

Query: 380 QYGDASHDRGGRINTTKESDRAPERDWSGPSNRKYRDERDPGADRDMPREKD--GHDYDW 207
           QYG+ SHDRGG  NT KE DRA ERDWSG S+R+YRD+R+ G DRDMPREKD  GHD+DW
Sbjct: 538 QYGEVSHDRGGWQNTMKEKDRASERDWSGSSDRRYRDDREAGYDRDMPREKDMGGHDHDW 597

Query: 206 PERRPHEDRE 177
           PERR  EDR+
Sbjct: 598 PERRHREDRD 607


>ref|XP_004165306.1| PREDICTED: uncharacterized LOC101212980 [Cucumis sativus]
          Length = 697

 Score =  214 bits (545), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
 Frame = -3

Query: 728 MMHP---MGQGFDPAXXXXXXXXXXXXGFPAAPTPPFSQMLSPFXXXXXXXXXXXXXXVN 558
           ++HP   MGQGFDP+            GFP AP PPFS +LS F              VN
Sbjct: 406 LLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 465

Query: 557 PAFFGRGMPANGMGMMNTTGIDGHGMGMWSDPSTSGWGGEDP-SGRAAESSYGDDAGSDH 381
           PAFFGRGMP NGMGMM T+G+DG  MGMWSDPS  GWG E+   GRA ESSYG++AGSD 
Sbjct: 466 PAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQ 525

Query: 380 QYGDASHDRGGRINTTKESDRAPERDWSGPSNRKYRDERDPGADRDMPREKD-GHDYDWP 204
            YG+ SH+RG   N+ KE DR  ERDWS  S+R+YRD+RD G DR+  +EKD G D+DWP
Sbjct: 526 HYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWP 585

Query: 203 ERRPHEDRE 177
           +RRP EDR+
Sbjct: 586 DRRPREDRD 594


>ref|XP_004162742.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101212739
           [Cucumis sativus]
          Length = 724

 Score =  214 bits (545), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
 Frame = -3

Query: 728 MMHP---MGQGFDPAXXXXXXXXXXXXGFPAAPTPPFSQMLSPFXXXXXXXXXXXXXXVN 558
           ++HP   MGQGFDP+            GFP AP PPFS +LS F              VN
Sbjct: 431 LLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 490

Query: 557 PAFFGRGMPANGMGMMNTTGIDGHGMGMWSDPSTSGWGGEDP-SGRAAESSYGDDAGSDH 381
           PAFFGRGMP NGMGMM T+G+DG  MGMWSDPS  GWG E+   GRA ESSYG++AGSD 
Sbjct: 491 PAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQ 550

Query: 380 QYGDASHDRGGRINTTKESDRAPERDWSGPSNRKYRDERDPGADRDMPREKD-GHDYDWP 204
            YG+ SH+RG   N+ KE DR  ERDWS  S+R+YRD+RD G DR+  +EKD G D+DWP
Sbjct: 551 HYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWP 610

Query: 203 ERRPHEDRE 177
           +RRP EDR+
Sbjct: 611 DRRPREDRD 619


>ref|XP_004148927.1| PREDICTED: uncharacterized protein LOC101212980 [Cucumis sativus]
          Length = 697

 Score =  214 bits (545), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
 Frame = -3

Query: 728 MMHP---MGQGFDPAXXXXXXXXXXXXGFPAAPTPPFSQMLSPFXXXXXXXXXXXXXXVN 558
           ++HP   MGQGFDP+            GFP AP PPFS +LS F              VN
Sbjct: 406 LLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 465

Query: 557 PAFFGRGMPANGMGMMNTTGIDGHGMGMWSDPSTSGWGGEDP-SGRAAESSYGDDAGSDH 381
           PAFFGRGMP NGMGMM T+G+DG  MGMWSDPS  GWG E+   GRA ESSYG++AGSD 
Sbjct: 466 PAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQ 525

Query: 380 QYGDASHDRGGRINTTKESDRAPERDWSGPSNRKYRDERDPGADRDMPREKD-GHDYDWP 204
            YG+ SH+RG   N+ KE DR  ERDWS  S+R+YRD+RD G DR+  +EKD G D+DWP
Sbjct: 526 HYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWP 585

Query: 203 ERRPHEDRE 177
           +RRP EDR+
Sbjct: 586 DRRPREDRD 594


>ref|XP_004148926.1| PREDICTED: uncharacterized protein LOC101212739 [Cucumis sativus]
          Length = 699

 Score =  214 bits (545), Expect = 2e-53
 Identities = 106/189 (56%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
 Frame = -3

Query: 728 MMHP---MGQGFDPAXXXXXXXXXXXXGFPAAPTPPFSQMLSPFXXXXXXXXXXXXXXVN 558
           ++HP   MGQGFDP+            GFP AP PPFS +LS F              VN
Sbjct: 406 LLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAPPFSGILSSFPPVGGVGLPGVAPHVN 465

Query: 557 PAFFGRGMPANGMGMMNTTGIDGHGMGMWSDPSTSGWGGEDP-SGRAAESSYGDDAGSDH 381
           PAFFGRGMP NGMGMM T+G+DG  MGMWSDPS  GWG E+   GRA ESSYG++AGSD 
Sbjct: 466 PAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGSEEQGGGRAGESSYGEEAGSDQ 525

Query: 380 QYGDASHDRGGRINTTKESDRAPERDWSGPSNRKYRDERDPGADRDMPREKD-GHDYDWP 204
            YG+ SH+RG   N+ KE DR  ERDWS  S+R+YRD+RD G DR+  +EKD G D+DWP
Sbjct: 526 HYGEGSHERGPWANSAKEKDRGSERDWSQSSDRRYRDDRDVGYDRERSKEKDPGPDHDWP 585

Query: 203 ERRPHEDRE 177
           +RRP EDR+
Sbjct: 586 DRRPREDRD 594


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